RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 MZT2AQ6P582 158 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 METAP1DQ6UB28 335 aaPredicted RBP9.12□□□□□ -0.95
SPARC-202ENST00000520687 THSD4Q6ZMP0 1018 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 GATAD2AQ86YP4 633 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 LYSMD2Q8IV50 215 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 MISPQ8IVT2 679 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 MS4A15Q8N5U1 240 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 ZSCAN1Q8NBB4 408 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 ATP6V1C2Q8NEY4 427 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 OR51G2Q8NGK0 314 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 OR1N1Q8NGS0 311 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 OR2T27Q8NH04 317 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 OR51A7Q8NH64 312 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 ZNF721Q8TF20 911 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 NAT6Q93015 286 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 ADIPOR1Q96A54 375 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 C3orf49Q96BT1 292 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 ZNF501Q96CX3 271 aaPredicted RBP9.12□□□□□ -0.95
SPARC-202ENST00000520687 TMCO6Q96DC7 493 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 FGF21Q9NSA1 209 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 SNTG1Q9NSN8 517 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 RYDENQ9NUL5 291 aaKnown RBP9.12□□□□□ -0.95
SPARC-202ENST00000520687 CHRNA9Q9UGM1 479 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 ADAM30Q9UKF2 790 aa9.12□□□□□ -0.95
SPARC-202ENST00000520687 SCN3AQ9NY46 2000 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 TENM4Q6N022 2769 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 IGLV3-12A0A075B6K2 115 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 ARPC4-TTLL3A0A0A6YYG9 625 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 A0A1B0GTQ1 180 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 CCDC182A6NF36 153 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 C12orf71A8MTZ7 269 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 TMEM127O75204 238 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 SLC2A10O95528 541 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 NTN1O95631 604 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SERPINA3P01011 423 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 FOLR1P15328 257 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 EPHA8P29322 1005 aaPredicted RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 IL12BP29460 328 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SDC2P34741 201 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 HOXD12P35452 270 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 OR1D4P47884 311 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 MTNR1BP49286 362 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SEPHS1P49903 392 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SLC25A1P53007 311 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 RPS4XP62701 263 aaKnown RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 PPP3R1P63098 170 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 CFHR1Q03591 330 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 FHL1Q13642 323 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 KCNAB1Q14722 419 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 PON3Q15166 354 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SF3A2Q15428 464 aaKnown RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 NSDHLQ15738 373 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 PERM1Q5SV97 790 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 C22orf42Q6IC83 251 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 C5orf46Q6UWT4 87 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 ATG4DQ86TL0 474 aaPredicted RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 TPRA1Q86W33 373 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SHISA5Q8N114 240 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 CADM3Q8N126 398 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SYS1Q8N2H4 156 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 ARIH2OSQ8N7S6 290 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 TEX19Q8NA77 164 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 BBS1Q8NFJ9 593 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 OR4D9Q8NGE8 314 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SPRYD4Q8WW59 207 aaPredicted RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 PHYHIPQ92561 330 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 KISS1RQ969F8 398 aaPredicted RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 OTULINQ96BN8 352 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 ERMAPQ96PL5 475 aaPredicted RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 ALG8Q9BVK2 526 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 OR8D2Q9GZM6 311 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 ADAM19Q9H013 955 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 NXF5Q9H1B4 397 aaKnown RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 RNF167Q9H6Y7 350 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 MOKQ9UQ07 419 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 MAU2Q9Y6X3 613 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 DMXL2Q8TDJ6 3036 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 SPAG17Q6Q759 2223 aa9.11□□□□□ -0.95
SPARC-202ENST00000520687 TNRC6BQ9UPQ9 1833 aaKnown RBP9.11□□□□□ -0.95
SPARC-202ENST00000520687 NINQ8N4C6 2090 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 TRAV27A0A087WT01 109 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 ALG1L2C9J202 215 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 J3QKU1 62 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 PLPP2O43688 288 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 CDC40O60508 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
SPARC-202ENST00000520687 REM1O75628 298 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 RFPL3O75679 317 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 PPP1R3DO95685 299 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 TXNDC12O95881 172 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 TDGF1P13385 188 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 CEACAM1P13688 526 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 CELP19835 753 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 PGCP20142 388 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 CSF2RBP32927 897 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 RPL4P36578 427 aaKnown RBP9.1□□□□□ -0.95
SPARC-202ENST00000520687 EIF2B2P49770 351 aaKnown RBP9.1□□□□□ -0.95
SPARC-202ENST00000520687 DIO1P49895 249 aa9.1□□□□□ -0.95
SPARC-202ENST00000520687 RPS7P62081 194 aaKnown RBP9.1□□□□□ -0.95
SPARC-202ENST00000520687 RPS25P62851 125 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms