RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 FYTTD1Q96QD9 318 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 ZMAT3Q9HA38 289 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 KLF15Q9UIH9 416 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 DKKL1Q9UK85 242 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 KCNE3Q9Y6H6 103 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 GAPDHSO14556 408 aaPredicted RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 ALDOBP05062 364 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 SLC2A5P22732 501 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 HLA-DMAP28067 261 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 ADPRHP54922 357 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 RACK1P63244 317 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 SPOCK1Q08629 439 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 DBPQ10586 325 aaPredicted RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 CTF1Q16619 201 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 C3orf38Q5JPI3 329 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 BEST3Q8N1M1 668 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 OR51Q1Q8NH59 317 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 PHOSPHO2Q8TCD6 241 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 Q96M85 177 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 C8orf33Q9H7E9 229 aaPredicted RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 SERGEFQ9UGK8 458 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 NUPL2O15504 423 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 TFP02787 698 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 GBX1Q14549 363 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 RAB11BQ15907 218 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 DUSP19Q8WTR2 217 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 PGAM5Q96HS1 289 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 PELOQ9BRX2 385 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 CRB3Q9BUF7 120 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 GALNT9Q9HCQ5 603 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 FANCFQ9NPI8 374 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 COPZ2Q9P299 210 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 V9GY05 133 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 ZNF318Q5VUA4 2279 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 DISC1C4P0D8 188 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 F5H5K5 113 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 SOX18P35713 384 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 EIF2B1Q14232 305 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 ZMAT1Q5H9K5 638 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 SLC22A10Q63ZE4 541 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 SAXO2Q658L1 398 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 VASNQ6EMK4 673 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 FBXO42Q6P3S6 717 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 LRRN1Q6UXK5 716 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 CREB3L2Q70SY1 520 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 GDPD3Q7L5L3 318 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 PRSS45Q7RTY3 260 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 LRRC56Q8IYG6 542 aaPredicted RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 ZNF440Q8IYI8 595 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 UCN3Q969E3 161 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 RBM24Q9BX46 236 aaKnown RBP10.85□□□□□ -0.67
SYNPO-204ENST00000519664 UBQLN4Q9NRR5 601 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 KLHL21Q9UJP4 597 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 RARRES3Q9UL19 164 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 THSD7AQ9UPZ6 1657 aa10.85□□□□□ -0.67
SYNPO-204ENST00000519664 NPIPA2E9PIF3 369 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 NPIPA3F8WFD2 350 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 TEX46H3BTG2 121 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 FGF17O60258 216 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 CD38P28907 300 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 SHHQ15465 462 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 CALHM3Q86XJ0 350 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 TET1Q8NFU7 2136 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 ABHD4Q8TB40 342 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 RASD2Q96D21 266 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 HHIPL1Q96JK4 782 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 INTS14Q96SY0 518 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 SDF2Q99470 211 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 TAS2R3Q9NYW6 316 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 ZMAT5Q9UDW3 170 aaKnown RBP10.84□□□□□ -0.67
SYNPO-204ENST00000519664 DAPP1Q9UN19 280 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 ZAR1LA6NP61 321 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 SCGNO76038 276 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
SYNPO-204ENST00000519664 CFL1P23528 166 aaKnown RBP10.84□□□□□ -0.67
SYNPO-204ENST00000519664 LSSP48449 732 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 TPMTP51580 245 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 ELP2Q6IA86 826 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 KIAA1211LQ6NV74 962 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 USP51Q70EK9 711 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 CD163Q86VB7 1156 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 OR5B2Q96R09 309 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 CSF3RQ99062 836 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 RPP25Q9BUL9 199 aaKnown RBP10.84□□□□□ -0.67
SYNPO-204ENST00000519664 SYT4Q9H2B2 425 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 C2orf42Q9NWW7 574 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 VSX1Q9NZR4 365 aaPredicted RBP10.84□□□□□ -0.67
SYNPO-204ENST00000519664 C19orf25Q9UFG5 118 aaPredicted RBP10.84□□□□□ -0.67
SYNPO-204ENST00000519664 ALG5Q9Y673 324 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 RP2O75695 350 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 MPIG6BO95866 241 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 TACR3P29371 465 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 PLGLB1Q02325 96 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 FAM27D1Q5T7N8 215 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 NXNL2Q5VZ03 156 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 LYPD4Q6UWN0 246 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 ESPNLQ6ZVH7 1005 aa10.84□□□□□ -0.67
SYNPO-204ENST00000519664 MED25Q71SY5 747 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms