RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 TAF8Q7Z7C8 310 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 RANBP3LQ86VV4 465 aaPredicted RBP7.55□□□□□ -1.2
SFXN1-211ENST00000515736 RNF113BQ8IZP6 322 aaKnown RBP7.55□□□□□ -1.2
SFXN1-211ENST00000515736 CYP4Z2PQ8N1L4 340 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 ZNF619Q8N2I2 560 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 CSNK1A1LQ8N752 337 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 MINDY2Q8NBR6 621 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 MORN4Q8NDC4 146 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 KBTBD8Q8NFY9 601 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 OR10G6Q8NH81 332 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 CCL4L1Q8NHW4 92 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 SLC37A2Q8TED4 501 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 ACOT11Q8WXI4 607 aaPredicted RBP7.55□□□□□ -1.2
SFXN1-211ENST00000515736 DNASE2BQ8WZ79 361 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 GGHQ92820 318 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 KTI12Q96EK9 354 aaPredicted RBP7.55□□□□□ -1.2
SFXN1-211ENST00000515736 NRTNQ99748 197 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 CCDC3Q9BQI4 270 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 NUDT16L1Q9BRJ7 211 aaKnown RBP7.55□□□□□ -1.2
SFXN1-211ENST00000515736 ZNF350Q9GZX5 532 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 FBXO8Q9NRD0 319 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 TBCCD1Q9NVR7 557 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 NLGN3Q9NZ94 848 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 KLHL20Q9Y2M5 609 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 WDR45Q9Y484 360 aa7.55□□□□□ -1.2
SFXN1-211ENST00000515736 FASNP49327 2511 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CABIN1Q9Y6J0 2220 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 KNL1Q8NG31 2342 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 HTR3EA5X5Y0 456 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 AGAP5A6NIR3 686 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 GLOD5A6NK44 160 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CLDN25C9JDP6 229 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 H3BN98 237 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CYR61O00622 381 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 P2RX6O15547 441 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 STX11O75558 287 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CSF2P04141 144 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ZNF883P0CG24 379 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 SLC35E2P0CK97 266 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CD36P16671 472 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 FPR3P25089 353 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ABCD3P28288 659 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CSTF2P33240 577 aaKnown RBP eCLIP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 RPS19P39019 145 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 MAP3K8P41279 467 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CAPZBP47756 277 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 GSSP48637 474 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CSNK1EP49674 416 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 PSMD4P55036 377 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 RGS8P57771 180 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 COPZ1P61923 177 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CDK5Q00535 292 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ST3GAL4Q11206 333 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 TMED1Q13445 227 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 C1DQ13901 141 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ERV3-1Q14264 604 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 NR1D2Q14995 579 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ZNHIT3Q15649 155 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 SMN1Q16637 294 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 DEFB134Q4QY38 66 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 KLHL22Q53GT1 634 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 TCTE1Q5JU00 501 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 FHL5Q5TD97 284 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 MFSD4BQ5TF39 518 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 SFRP4Q6FHJ7 346 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 SLC27A4Q6P1M0 643 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 PODNL1Q6PEZ8 512 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 FRRS1Q6ZNA5 592 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 SLC46A3Q7Z3Q1 461 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ARHGAP22Q7Z5H3 698 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 GRAMD2AQ8IUY3 354 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ZNF595Q8IYB9 648 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 AMER2Q8N7J2 671 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 Q8NA96 180 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 OR7G2Q8NG99 324 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 OR4K5Q8NGD3 323 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 OR6C4Q8NGE1 309 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 OR6T1Q8NGN1 323 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 OR52P1PQ8NH57 321 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 VANGL1Q8TAA9 524 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 PIGXQ8TBF5 258 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 TEX47Q8TBZ9 253 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 OSTF1Q92882 214 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 RFKQ969G6 155 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CTHRC1Q96CG8 243 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 SLC38A2Q96QD8 506 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 LMF1Q96S06 567 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 MND1Q9BWT6 205 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 MMP27Q9H306 513 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 LIN28AQ9H9Z2 209 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ISYNA1Q9NPH2 558 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 LIN7CQ9NUP9 197 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CCDC59Q9P031 241 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 TESQ9UGI8 421 aaKnown RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ZNF443Q9Y2A4 671 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-211ENST00000515736 TMEM5Q9Y2B1 443 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 CA5BQ9Y2D0 317 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 ZZEF1O43149 2961 aa7.54□□□□□ -1.2
SFXN1-211ENST00000515736 DSPP15924 2871 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms