RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 ELFN2Q5R3F8 820 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 TEX35Q5T0J7 233 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 MROH9Q5TGP6 573 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 ACSM2BQ68CK6 577 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 GTF2IRD2BQ6EKJ0 949 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 C11orf87Q6NUJ2 197 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 C3orf33Q6P1S2 294 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 SPATC1Q76KD6 591 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 C1QL2Q7Z5L3 287 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 GTF2IRD2Q86UP8 949 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 Q8N1X5 172 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 OR2L13Q8N349 312 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 ZNF527Q8NB42 609 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 OR51F2Q8NH61 342 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 CEP70Q8NHQ1 597 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 KIF18AQ8NI77 898 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 GPR119Q8TDV5 335 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 TRPC4APQ8TEL6 797 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 PYROXD1Q8WU10 500 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 CKAP2Q8WWK9 683 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 GTF3AQ92664 365 aaKnown RBP3.12□□□□□ -1.91
USP46-205ENST00000504078 CDKL2Q92772 493 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 C16orf58Q96GQ5 468 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 ARL5BQ96KC2 179 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 PKNOX2Q96KN3 472 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 ZNF48Q96MX3 618 aaPredicted RBP3.12□□□□□ -1.91
USP46-205ENST00000504078 AMDHD1Q96NU7 426 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 MS4A4EQ96PG1 132 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 SLC38A2Q96QD8 506 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 OSBPL9Q96SU4 736 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 RAB1BQ9H0U4 201 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 OR51B6Q9H340 312 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 PLK3Q9H4B4 646 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 MYOZ1Q9NP98 299 aaPredicted RBP3.12□□□□□ -1.91
USP46-205ENST00000504078 ZNF275Q9NSD4 429 aaPredicted RBP3.12□□□□□ -1.91
USP46-205ENST00000504078 DDX28Q9NUL7 540 aaKnown RBP3.12□□□□□ -1.91
USP46-205ENST00000504078 NSMCE4AQ9NXX6 385 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 AHSPQ9NZD4 102 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 EMC3Q9P0I2 261 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 ARMCX1Q9P291 453 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 MYEF2Q9P2K5 600 aaKnown RBP3.12□□□□□ -1.91
USP46-205ENST00000504078 MALT1Q9UDY8 824 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 ZNF225Q9UK10 706 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 C19orf53Q9UNZ5 99 aaPredicted RBP3.12□□□□□ -1.91
USP46-205ENST00000504078 AMDHD2Q9Y303 409 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 ACOT9Q9Y305 439 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 SNX24Q9Y343 169 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 TSC22D4Q9Y3Q8 395 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 TIMM22Q9Y584 194 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 KCNE3Q9Y6H6 103 aa3.12□□□□□ -1.91
USP46-205ENST00000504078 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 A0A087WV62 115 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 CCDC189A1A4V9 331 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ISPDA4D126 451 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 GJE1A6NN92 205 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 A8MT66 165 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 MYO1GB0I1T2 1018 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 B9A039 149 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 E7ESA3 106 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 G3V4G9 280 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 KIF2AO00139 706 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 GTPBP1O00178 669 aaKnown RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 SULT2B1O00204 365 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 PIN1P1O15428 100 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 SMIM24O75264 130 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 MRPL33O75394 65 aaKnown RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 NKX2-2O95096 273 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 HTR3BO95264 441 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ERCC1P07992 297 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 ANXA4P09525 319 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 UBTFL6P0CB48 400 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 NAT2P11245 290 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 UBL4AP11441 157 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 DDCP20711 480 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ATP6V1C1P21283 382 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 PCMT1P22061 227 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 COL8A2P25067 703 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 GIFP27352 417 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 RYKP34925 604 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 SPRP35270 261 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 SOAT1P35610 550 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 MAGEB1P43366 347 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ASMTP46597 345 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 CAPZA2P47755 286 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 SERPINB8P50452 374 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 P2RX1P51575 399 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 ARFIP1P53367 373 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 GYS2P54840 703 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 PSMD4P55036 377 aaKnown RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 FOXA1P55317 472 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 RAC3P60763 192 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 POU6F2P78424 691 aaPredicted RBP3.11□□□□□ -1.91
USP46-205ENST00000504078 LCN2P80188 198 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 HGFACQ04756 655 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 FOXL1Q12952 345 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 BAMBIQ13145 260 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 FAM83EQ2M2I3 478 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 GGTA1PQ4G0N0 100 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 TIGD2Q4W5G0 525 aa3.11□□□□□ -1.91
USP46-205ENST00000504078 SYT14P1Q58G82 188 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms