RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 CD40P25942 277 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 TACR3P29371 465 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 TTKP33981 857 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 FUT5Q11128 374 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 TUSC1Q2TAM9 212 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 CEP85LQ5SZL2 805 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 NXNQ6DKJ4 435 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 HMBOX1Q6NT76 420 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 SEZ6L2Q6UXD5 910 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 SPATA19Q7Z5L4 167 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 PEX5LQ8IYB4 626 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 ANKFN1Q8N957 763 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 ANKRD42Q8N9B4 389 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 FAM71CQ8NEG0 241 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 OR52E4Q8NGH9 312 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 CCDC115Q96NT0 180 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 TRNT1Q96Q11 434 aaKnown RBP9.44□□□□□ -0.9
SNCA-207ENST00000502987 SORT1Q99523 831 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 DHRS9Q9BPW9 319 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 INPP5KQ9BT40 448 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 CACYBPQ9HB71 228 aaKnown RBP9.44□□□□□ -0.9
SNCA-207ENST00000502987 EXOSC3Q9NQT5 275 aaKnown RBP9.44□□□□□ -0.9
SNCA-207ENST00000502987 BTNL2Q9UIR0 455 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 TRAPPC4Q9Y296 219 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 ABCA1O95477 2261 aa9.44□□□□□ -0.9
SNCA-207ENST00000502987 SONP18583 2426 aaKnown RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 GOLGA8QA0A0J9YX86 632 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 TMEM72A0PK05 275 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 FAM234BA2RU67 622 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 PRAMEF27A3QJZ7 478 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 GOLGA8OA6NCC3 632 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 CFAP73A6NFT4 308 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 GOLGA8NF8WBI6 632 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 TLX2O43763 284 aaPredicted RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 KRT75O95678 551 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 IFNA2P01563 188 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 C1QCP02747 245 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 PGRP06401 933 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 DBIP07108 87 aaKnown RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 KITP10721 976 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 BMP4P12644 408 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 SLC1A3P43003 542 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 FOXG1P55316 489 aaPredicted RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 IRX1P78414 480 aaPredicted RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 TGFBR3Q03167 851 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 SPOCK1Q08629 439 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 GABRA6Q16445 453 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 OTUD3Q5T2D3 398 aaPredicted RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 TMEM225Q6GV28 225 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 WDR93Q6P2C0 686 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 KLHL24Q6TFL4 600 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 CLEC2AQ6UVW9 174 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 LRRC74BQ6ZQY2 392 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 DTX2Q86UW9 622 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 CMIPQ8IY22 773 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 MUC15Q8N387 334 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 CADM2Q8N3J6 435 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 HTRA1Q92743 480 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 TEX37Q96LM6 180 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 MUS81Q96NY9 551 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 SLC38A1Q9H2H9 487 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 FKRPQ9H9S5 495 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 MEAF6Q9HAF1 191 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 SSU72Q9NP77 194 aaKnown RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 CBLN4Q9NTU7 201 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 OSGIN1Q9UJX0 560 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 SLC9A8Q9Y2E8 581 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 SLC25A15Q9Y619 301 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 MXRA5Q9NR99 2828 aa9.43□□□□□ -0.9
SNCA-207ENST00000502987 ANK3Q12955 4377 aaKnown RBP9.43□□□□□ -0.9
SNCA-207ENST00000502987 COL6A5A8TX70 2615 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 PLCE1Q9P212 2302 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 DNHD1Q96M86 4753 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 AGAP5A6NIR3 686 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 TRPC5OSA6NMA1 111 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 A8MV72 311 aaPredicted RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 RFXANKO14593 260 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 ZNF208O43345 1280 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 CD5LO43866 347 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 AKR7A3O95154 331 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 GPIP06744 558 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 CHRM4P08173 479 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 ITGA5P08648 1049 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 ALDOCP09972 364 aaKnown RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 GKN3PP0CG01 181 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 IMPDH2P12268 514 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 NCF2P19878 526 aaPredicted RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 NTF4P34130 210 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 CDKN2CP42773 168 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 CRATP43155 626 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 SLC16A1P53985 500 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 DSCR9P59020 149 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 PRPS1P60891 318 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 COPZ1P61923 177 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 TXNL4AP83876 142 aaKnown RBP9.42□□□□□ -0.9
SNCA-207ENST00000502987 CHRNB3Q05901 458 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 KRTAP1-1Q07627 177 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 LRRC74AQ0VAA2 488 aa9.42□□□□□ -0.9
SNCA-207ENST00000502987 BST1Q10588 318 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms