RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TMED7Q9Y3B3 224 aa8.57□□□□□ -1.04
SF3B1-211ENST00000487698 TRAV36DV7A0A075B6V5 113 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 TMEM72A0PK05 275 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ZC3H12DA2A288 527 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 TRIM64BA6NI03 449 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 SNTNA6NMZ2 147 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 CDRT15L2A8MXV6 281 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 PROB1E7EW31 1015 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 TM4SF5O14894 197 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 SUSD5O60279 629 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 PTHP01270 115 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 BGLAPP02818 100 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 PEPDP12955 493 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 UQCRC1P31930 480 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 PRPS1P60891 318 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 RAB40BQ12829 278 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ANKDD1AQ495B1 522 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 SLC25A53Q5H9E4 307 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 GPR107Q5VW38 600 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ARHGAP11AQ6P4F7 1023 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 CXXC5Q7LFL8 322 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 MARCH9Q86YJ5 346 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 BBS1Q8NFJ9 593 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ASB15Q8WXK1 588 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 LGALS12Q96DT0 336 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 TMEM80Q96HE8 168 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 NPAS1Q99742 590 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 YIPF3Q9GZM5 350 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 NAA50Q9GZZ1 169 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 FKRPQ9H9S5 495 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 NRIP3Q9NQ35 241 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 NANSQ9NR45 359 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 TAS2R16Q9NYV7 291 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF229Q9UJW7 825 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 DIMT1Q9UNQ2 313 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 COMMD3-BMI1R4GMX3 469 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 A8MVM7 634 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 H3BMQ9 156 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ARPC3O15145 178 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 CD82P27701 267 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 MTNR1AP48039 350 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 TMBIM6P55061 237 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 CDH11P55287 796 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 GABREP78334 506 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ATP1A4Q13733 1029 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 GXYLT1Q4G148 440 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 SLC35F1Q5T1Q4 408 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 NIPAL3Q6P499 406 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 C5orf46Q6UWT4 87 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ARSKQ6UWY0 536 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 IL20RBQ6UXL0 311 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 DPY19L2P2Q6ZN68 376 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 SLC16A12Q6ZSM3 486 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 DTX1Q86Y01 620 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 RAB43Q86YS6 212 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 CPOQ8IVL8 374 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 GID4Q8IVV7 300 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ALDH16A1Q8IZ83 802 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 FADS6Q8N9I5 356 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 LRRC75AQ8NAA5 344 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 OR2M3Q8NG83 312 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 OR52I1Q8NGK6 324 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 MOSPD2Q8NHP6 518 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 STK35Q8TDR2 534 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 PAQR8Q8TEZ7 354 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 RFKQ969G6 155 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 NKD1Q969G9 470 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 C12orf43Q96C57 262 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 NMD3Q96D46 503 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 YIPF6Q96EC8 236 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 COG8Q96MW5 612 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 FUNDC2Q9BWH2 189 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 HCAR1Q9BXC0 346 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 ANGPTL4Q9BY76 406 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 FGF20Q9NP95 211 aaPredicted RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 PTTG2Q9NZH5 202 aa8.56□□□□□ -1.04
SF3B1-211ENST00000487698 LSM2Q9Y333 95 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 MRPS18BQ9Y676 258 aaKnown RBP8.56□□□□□ -1.04
SF3B1-211ENST00000487698 MED13Q9UHV7 2174 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 IRGMA1A4Y4 181 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 FAM183AA6NL82 134 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 RIIAD1A6NNX1 92 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 M0R082 166 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 TRMUO75648 421 aaKnown RBP8.55□□□□□ -1.04
SF3B1-211ENST00000487698 MT-ATP6P00846 226 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 CCL3P10147 92 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 CCNA2P20248 432 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 PSMB9P28065 219 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 GSTT1P30711 240 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 HTR1FP30939 366 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 TGFBR2P37173 567 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 APOBEC1P41238 236 aaKnown RBP8.55□□□□□ -1.04
SF3B1-211ENST00000487698 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
SF3B1-211ENST00000487698 ST13P50502 369 aaKnown RBP8.55□□□□□ -1.04
SF3B1-211ENST00000487698 DOC2BQ14184 412 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 PLPPR5Q32ZL2 321 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 KLHL22Q53GT1 634 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 C1QL3Q5VWW1 255 aa8.55□□□□□ -1.04
SF3B1-211ENST00000487698 PLBD1Q6P4A8 553 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms