RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 APEHP13798 732 aaKnown RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 PAX7P23759 505 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 UQCRC1P31930 480 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 LIPAP38571 399 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 SOX3P41225 446 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 CASP3P42574 277 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 MLF1P58340 268 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 RPS18P62269 152 aaKnown RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 RPS15P62841 145 aaKnown RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 ITGADQ13349 1161 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 SNTA1Q13424 505 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 TIGD6Q17RP2 521 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 SLC25A53Q5H9E4 307 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 SLC35F1Q5T1Q4 408 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 H3F3CQ6NXT2 135 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 ARHGAP11AQ6P4F7 1023 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 C19orf48Q6RUI8 117 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 MEPCEQ7L2J0 689 aaKnown RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 RPS19BP1Q86WX3 136 aaKnown RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 DND1Q8IYX4 353 aaKnown RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 BBS1Q8NFJ9 593 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 OR6S1Q8NH40 331 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 STK35Q8TDR2 534 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 TAAR8Q969N4 342 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 OR5M11Q96RB7 305 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 MYCBPQ99417 103 aaPredicted RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 JAM3Q9BX67 310 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 RACGAP1Q9H0H5 632 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 FKRPQ9H9S5 495 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 ZNF160Q9HCG1 818 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 GALNT9Q9HCQ5 603 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 NANSQ9NR45 359 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 H2AFY2Q9P0M6 372 aaPredicted RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 CLEC2DQ9UHP7 191 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 ZNF229Q9UJW7 825 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 CHCHD2Q9Y6H1 151 aaPredicted RBP12.75□□□□□ -0.37
CLK3-204ENST00000483723 PCSK5Q92824 1860 aa12.75□□□□□ -0.37
CLK3-204ENST00000483723 TRAV36DV7A0A075B6V5 113 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 TMEM72A0PK05 275 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 A8MVM7 634 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 MCIDASD6RGH6 385 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 J3QRE1 110 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 M0R3G1 203 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 TP53I11O14683 189 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 NOL3O60936 208 aaKnown RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 PRKCAP17252 672 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 CCNA2P20248 432 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 SLC2A5P22732 501 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 SH3BGRP55822 239 aaPredicted RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 DOC2BQ14184 412 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 ARMC4Q5T2S8 1044 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 BICRALQ6AI39 1079 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 NIPAL3Q6P499 406 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 PLBD1Q6P4A8 553 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 C5orf46Q6UWT4 87 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 NLGN4YQ8NFZ3 816 aaPredicted RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 ERMAPQ96PL5 475 aaPredicted RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 PTDSS2Q9BVG9 487 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 CDCP1Q9H5V8 836 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 SH2D2AQ9NP31 389 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 MED11Q9P086 117 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 KLHL21Q9UJP4 597 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 ERGIC3Q9Y282 383 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 IER3IP1Q9Y5U9 82 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 WIF1Q9Y5W5 379 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 CPAMD8Q8IZJ3 1885 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 FAM183AA6NL82 134 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 RIIAD1A6NNX1 92 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 PRR23D1E9PI22 279 aaPredicted RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 IMPA2O14732 288 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 GMFGO60234 142 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 SUSD5O60279 629 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 MT-ATP6P00846 226 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 IFNGP01579 166 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 PRR23D2P0DMB1 279 aaPredicted RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 CD36P16671 472 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 F8A1P23610 371 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 APOBEC1P41238 236 aaKnown RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 Q0VFX4 171 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 AQP6Q13520 282 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 ARMCX4Q5H9R4 360 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 OR5M10Q6IEU7 315 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 P2RY8Q86VZ1 359 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 SLC37A3Q8NCC5 494 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 DEFB124Q8NES8 71 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 MOSPD2Q8NHP6 518 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 MGLLQ99685 303 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 ZNF649Q9BS31 505 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 HCAR1Q9BXC0 346 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 HAO2Q9NYQ3 351 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 KLRF1Q9NZS2 232 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 SLC6A5Q9Y345 797 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 EXOSC1Q9Y3B2 195 aaKnown RBP12.74□□□□□ -0.37
CLK3-204ENST00000483723 HRH3Q9Y5N1 445 aa12.74□□□□□ -0.37
CLK3-204ENST00000483723 CACNA1HO95180 2353 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 TMEM129A0AVI4 362 aa12.73□□□□□ -0.37
CLK3-204ENST00000483723 ZC3H12DA2A288 527 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms