RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MOV10Q9HCE1 1003 aaKnown RBP17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 DYNLRB1Q9NP97 96 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 TMEM45AQ9NWC5 275 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 MKLN1Q9UL63 735 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 PCDHGB4Q9UN71 923 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 SLC35A3Q9Y2D2 325 aa17.52■□□□□ 0.4
PDLIM1-202ENST00000477757 BCAS1O75363 584 aaPredicted RBP17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 C6orf47O95873 294 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 IMPDH2P12268 514 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 THBS4P35443 961 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 DNAJB13P59910 316 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 UBE2NP61088 152 aaKnown RBP17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 RPS26P62854 115 aaKnown RBP17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 IL1RL1Q01638 556 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 THSD4Q6ZMP0 1018 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 FAM169BQ8N8A8 192 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 ZIC4Q8N9L1 334 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 OR9K2Q8NGE7 335 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 OR5AK3PQ8NH89 298 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 CLDND2Q8NHS1 167 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 FMO2Q99518 471 aa17.51■□□□□ 0.39
PDLIM1-202ENST00000477757 TMEM129A0AVI4 362 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 LYNX1G3V0Z9 82 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 AZIN1O14977 448 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 LGI1O95970 557 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 TFP02787 698 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 LYNX1P0DP58 116 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 RYKP34925 604 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 DEFA6Q01524 100 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 POU3F1Q03052 451 aaPredicted RBP17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 MAPK14Q16539 360 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 LSM12Q3MHD2 195 aaKnown RBP17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 GALNTL6Q49A17 601 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 OLIG3Q7RTU3 272 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 AAED1Q7RTV5 226 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 SPATA21Q7Z572 469 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 CDK20Q8IZL9 346 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 ANKRD27Q96NW4 1050 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 ZNF385AQ96PM9 386 aaKnown RBP17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 EXOSC3Q9NQT5 275 aaKnown RBP17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 ATAD3AQ9NVI7 634 aa17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 PRKDCP78527 4128 aaKnown RBP17.5■□□□□ 0.39
PDLIM1-202ENST00000477757 VWFP04275 2813 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 A0A0G2JK05 382 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 DUXAA6NLW8 204 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 VSTM5A8MXK1 200 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 ZNF587BE7ETH6 402 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 ZNF208O43345 1280 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 IGKV3-15P01624 115 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 LINC00032P0C843 101 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 CCNA2P20248 432 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 HTR3AP46098 478 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 TUBA1BP68363 451 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 TUBA4AP68366 448 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 PLAURQ03405 335 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 ARHGAP11BQ3KRB8 267 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 AP1ARQ63HQ0 302 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 TUBA1AQ71U36 451 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 TEX29Q8N6K0 151 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 NATD1Q8N6N6 113 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 OR51F2Q8NH61 342 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 MAGEE2Q8TD90 523 aaPredicted RBP17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 CKAP2Q8WWK9 683 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 BCL2L2Q92843 193 aaPredicted RBP17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 DDIT4LQ96D03 193 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 AURKBQ96GD4 344 aaPredicted RBP17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 ALKBH3Q96Q83 286 aaPredicted RBP17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 LRRC37BQ96QE4 947 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 ZNF747Q9BV97 191 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 SF3B5Q9BWJ5 86 aaKnown RBP17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 RACGAP1Q9H0H5 632 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 PIF1Q9H611 641 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 LPAR2Q9HBW0 351 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 DCDC2Q9UHG0 476 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 PCDHGB1Q9Y5G3 927 aa17.49■□□□□ 0.39
PDLIM1-202ENST00000477757 TMED7-TICAM2A0A0A6YYA0 188 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 TMEM114B3SHH9 223 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 KRT33AO76009 404 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 PROCP04070 461 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 ABHD2P08910 425 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 OTUD3Q5T2D3 398 aaPredicted RBP17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 SHISA2Q6UWI4 295 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 MYPOPQ86VE0 399 aaPredicted RBP17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 PMM1Q92871 262 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 NELFAQ9H3P2 528 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 TPK1Q9H3S4 243 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 TMED7Q9Y3B3 224 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 FIS1Q9Y3D6 152 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 DNAJC15Q9Y5T4 150 aa17.48■□□□□ 0.39
PDLIM1-202ENST00000477757 TMEM72A0PK05 275 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 SH3PXD2BA1X283 911 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 NR5A2O00482 541 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 GLRA3O75311 464 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 CHEK2O96017 543 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 PNPP00491 289 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 GUSBP08236 651 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 ADRA2AP08913 450 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 SAGP10523 405 aaPredicted RBP17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 MAPK1P28482 360 aa17.47■□□□□ 0.39
PDLIM1-202ENST00000477757 ECHS1P30084 290 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms