RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 OR5M1Q8NGP8 315 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 TMEM234Q8WY98 164 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 C1GALT1C1Q96EU7 318 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 GNRHR2Q96P88 292 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 IFT27Q9BW83 186 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 CXorf56Q9H5V9 222 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 SEC14L4Q9UDX3 406 aa13.08□□□□□ -0.32
COL4A6-206ENST00000477085 ANKRD33BA6NCL7 494 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 GFRA3O60609 400 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 STSP08842 583 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 TSPAN19P0C672 248 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 TCEA1P23193 301 aaKnown RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 AQP2P41181 271 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 SLC9A3P48764 834 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 AIMP2Q13155 320 aaKnown RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 NEDD8Q15843 81 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 RPL13AP3Q6NVV1 102 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 PLCZ1Q86YW0 608 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 CYP4Z2PQ8N1L4 340 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 C10orf53Q8N6V4 93 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 BBS1Q8NFJ9 593 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 IPCEF1Q8WWN9 437 aaPredicted RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 KIAA1143Q96AT1 154 aaPredicted RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 SGCZQ96LD1 299 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 IP6K3Q96PC2 410 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 SLC38A2Q96QD8 506 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 HCAR1Q9BXC0 346 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 CCDC90BQ9GZT6 254 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 NANSQ9NR45 359 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 PCDHGB1Q9Y5G3 927 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 EML6Q6ZMW3 1958 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 TRAV36DV7A0A075B6V5 113 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 HTR3EA5X5Y0 456 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 TRABD2BA6NFA1 517 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 FAM183AA6NL82 134 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 A8MVM7 634 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 KDM4EB2RXH2 506 aaPredicted RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 SNPHO15079 494 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 RGS10O43665 173 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 CDK1P06493 297 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 JUNBP17275 347 aaPredicted RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 ITGA3P26006 1051 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 UQCRC1P31930 480 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 GRK5P34947 590 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 CD96P40200 585 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 APOBEC1P41238 236 aaKnown RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 HTR3AP46098 478 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 ZNF91Q05481 1191 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 C1orf140Q5VVS0 124 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 GTF2IRD2BQ6EKJ0 949 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 SPINK14Q6IE38 97 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 PRSS48Q7RTY5 328 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 GTF2IRD2Q86UP8 949 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 ANKK1Q8NFD2 765 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 OR52L1Q8NGH7 329 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 ARL5BQ96KC2 179 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 UBL7Q96S82 380 aaPredicted RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 LHPPQ9H008 270 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 RBM38Q9H0Z9 239 aaKnown RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 HINT3Q9NQE9 182 aaKnown RBP13.07□□□□□ -0.32
COL4A6-206ENST00000477085 DEPPQ9NTK1 212 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 CHRNA9Q9UGM1 479 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 HIF3AQ9Y2N7 669 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 ADAM18Q9Y3Q7 739 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 PCDHGB6Q9Y5F9 930 aa13.07□□□□□ -0.32
COL4A6-206ENST00000477085 BLOC1S5-TXNDC5H3BN57 136 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 H3BSA7 217 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 TRIM3O75382 744 aaPredicted RBP13.06□□□□□ -0.32
COL4A6-206ENST00000477085 NEURL1O76050 574 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 NDUFB2O95178 105 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 HMGN1P05114 100 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
COL4A6-206ENST00000477085 SLC6A6P31641 620 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 DNASE1L1P49184 302 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 ZNF41P51814 821 aaPredicted RBP13.06□□□□□ -0.32
COL4A6-206ENST00000477085 ST3GAL4Q11206 333 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 CLN3Q13286 438 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 CPOQ8IVL8 374 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 STK35Q8TDR2 534 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 FAR1Q8WVX9 515 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 PTP4A1Q93096 173 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 Q96MT0 163 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 SIGLEC12Q96PQ1 595 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 TAPBPLQ9BX59 468 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 MED20Q9H944 212 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 TAS2R16Q9NYV7 291 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 TAS2R5Q9NYW4 299 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 ZNF229Q9UJW7 825 aa13.06□□□□□ -0.32
COL4A6-206ENST00000477085 PTPRZ1P23471 2315 aaPredicted RBP13.06□□□□□ -0.32
COL4A6-206ENST00000477085 DOCK10Q96BY6 2186 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 CFAP47Q6ZTR5 3102 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 PINLYPA6NC86 204 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 ARGFXA6NJG6 315 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 FTCDNL1E5RQL4 147 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 IMPA2O14732 288 aa13.05□□□□□ -0.32
COL4A6-206ENST00000477085 ZIC3O60481 467 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms