RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 COMMD1Q8N668 190 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 OR10H4Q8NGA5 316 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 OR52E1Q8NGJ3 308 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 OR2T3Q8NH03 318 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 UBA3Q8TBC4 463 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 RAB3IL1Q8TBN0 382 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 CIDECQ96AQ7 238 aaPredicted RBP2.7□□□□□ -1.98
CD46-213ENST00000471987 RAD51AP1Q96B01 352 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 TSNARE1Q96NA8 513 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 ACBD6Q9BR61 282 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 FUNDC2Q9BWH2 189 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 RAB17Q9H0T7 212 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 OR52A5Q9H2C5 316 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 OR51V1Q9H2C8 321 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 CTSFQ9UBX1 484 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 TRIM10Q9UDY6 481 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 TRMT6Q9UJA5 497 aaKnown RBP2.7□□□□□ -1.98
CD46-213ENST00000471987 RPAP1Q9BWH6 1393 aaPredicted RBP2.7□□□□□ -1.98
CD46-213ENST00000471987 SYNJ2O15056 1496 aa2.7□□□□□ -1.98
CD46-213ENST00000471987 UBE4BO95155 1302 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 NCAPD2Q15021 1401 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CC2D2AQ9P2K1 1620 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 IGKV2-28A0A075B6P5 120 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 C13orf42A0A1B0GVH6 325 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 MACROD2A1Z1Q3 448 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ARHGAP42A6NI28 874 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CENPBD1B2RD01 187 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 GOLGA8KD6RF30 607 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ZNF701M0R085 212 aaPredicted RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 BIRC5O15392 142 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 AKR7A2O43488 359 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CHMP2AO43633 222 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 DNAJB6O75190 326 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CLPXO76031 633 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 SEMA3DO95025 777 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 MBD3O95983 291 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 IL1BP01584 269 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 IGKV2D-28P01615 120 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 HOXB7P09629 217 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ATF6P18850 670 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 TCN1P20061 433 aaPredicted RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 MSR1P21757 451 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ALDH3A1P30838 453 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 HOXA9P31269 272 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 SYKP43405 635 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 GPR4P46093 362 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CEBPDP49716 269 aaPredicted RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 AIF1P55008 147 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 GEMP55040 296 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ITGB3BPQ13352 177 aaPredicted RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 NDUFA5Q16718 116 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 HNRNPA1L2Q32P51 320 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 ZNF789Q5FWF6 425 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ZNF691Q5VV52 312 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CARD17Q5XLA6 110 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 KCTD11Q693B1 232 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 SPECC1LQ69YQ0 1117 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CDC42EP5Q6NZY7 148 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 PMF1Q6P1K2 205 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ATRAIDQ6UW56 229 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 UTS2BQ765I0 119 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 BZW1Q7L1Q6 419 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 TRPM8Q7Z2W7 1104 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 DCXRQ7Z4W1 244 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 FAM228AQ86W67 206 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CCDC50Q8IVM0 306 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 C10orf67Q8IYJ2 551 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CCNYL1Q8N7R7 359 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ASCC1Q8N9N2 400 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 FNDC5Q8NAU1 212 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 MINDY2Q8NBR6 621 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 BPIFCQ8NFQ6 507 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 TTLQ8NG68 377 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 OR5T1Q8NG75 326 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 DYDC1Q8WWB3 177 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 CAPSLQ8WWF8 208 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 C12orf66Q96MD2 445 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 RIT2Q99578 217 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 SLC29A1Q99808 456 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 C11orf70Q9BRQ4 267 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 SPATA16Q9BXB7 569 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 C6orf62Q9GZU0 229 aaPredicted RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 DRC3Q9H069 523 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 DHX33Q9H6R0 707 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 ALG9Q9H6U8 611 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 METTL8Q9H825 291 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 METTL7AQ9H8H3 244 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 NT5MQ9NPB1 228 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 DMAP1Q9NPF5 467 aaPredicted RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 MRPL40Q9NQ50 206 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 EXOSC3Q9NQT5 275 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 DNAJC17Q9NVM6 304 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 NKIRAS1Q9NYS0 192 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 ERVK-18Q9QC07 812 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 KCNN3Q9UGI6 736 aa2.69□□□□□ -1.98
CD46-213ENST00000471987 BZW2Q9Y6E2 419 aaKnown RBP2.69□□□□□ -1.98
CD46-213ENST00000471987 HELTA6NFD8 242 aa2.68□□□□□ -1.98
CD46-213ENST00000471987 OR6C70A6NIJ9 312 aa2.68□□□□□ -1.98
CD46-213ENST00000471987 GABRR3A8MPY1 467 aa2.68□□□□□ -1.98
CD46-213ENST00000471987 C12orf71A8MTZ7 269 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms