RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 BET1O15155 118 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 MSH4O15457 936 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 LANCL1O43813 399 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ADCY5O95622 1261 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 CISD3P0C7P0 127 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 PPIAL4GP0DN37 164 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 RNASE2P10153 161 aaKnown RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TDGF1P13385 188 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 MUC1P15941 1255 aaPredicted RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 PGCP20142 388 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TPSB2P20231 275 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 NPY1RP25929 384 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ANXA13P27216 316 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 YWHABP31946 246 aaKnown RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SLC26A3P40879 764 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 PTGDSP41222 190 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 KIR2DS4P43632 304 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ASMTP46597 345 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 UBE2AP49459 152 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 DAP3P51398 398 aaKnown RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TDGF1P3P51864 188 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 HSPA2P54652 639 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 KRTAP12-3P60328 96 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 KRTAP12-4P60329 112 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 CACNG7P62955 275 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 CNTN2Q02246 1040 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 HSF2Q03933 536 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 AP1B1Q10567 949 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 PPP2R5CQ13362 524 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 GAMTQ14353 236 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 KIAA0087Q14695 138 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 GNMTQ14749 295 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TRIP10Q15642 601 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TPSAB1Q15661 275 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TMEM183BQ1AE95 376 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 RSPO1Q2MKA7 263 aaPredicted RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TRIM16LQ309B1 348 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 RFX4Q33E94 735 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 OTOGLQ3ZCN5 2332 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 BCL7AQ4VC05 210 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF311Q5JNZ3 666 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TIGD3Q6B0B8 471 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ATL3Q6DD88 541 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 FRMPD2BQ6IN97 320 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 NANOGP8Q6NSW7 305 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 NIPAL3Q6P499 406 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF620Q6ZNG0 422 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 C19orf35Q6ZS72 473 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 CENPUQ71F23 418 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF571Q7Z3V5 609 aaPredicted RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TMEM183AQ8IXX5 376 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ELMOD2Q8IZ81 293 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 FTMTQ8N4E7 242 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ARRDC1Q8N5I2 433 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 DHRSXQ8N5I4 330 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 KIR3DL3Q8N743 410 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 FAM86B1Q8N7N1 296 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 MRPS31Q92665 395 aaKnown RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ASB9Q96DX5 294 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 RMI2Q96E14 147 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 C14orf79Q96F83 325 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 BMFQ96LC9 184 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SAMD8Q96LT4 415 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 C12orf66Q96MD2 445 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SLC35A5Q9BS91 424 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ULBP2Q9BZM5 246 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 RAB17Q9H0T7 212 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 DEFB127Q9H1M4 99 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 IFI27L2Q9H2X8 130 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 RHBGQ9H310 441 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SRMSQ9H3Y6 488 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SMYD3Q9H7B4 428 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ECT2Q9H8V3 914 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SIAEQ9HAT2 523 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 VAT1LQ9HCJ6 419 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SOHLH2Q9NX45 425 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 AATFQ9NY61 560 aaKnown RBP eCLIP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 AIPL1Q9NZN9 384 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ATP10DQ9P241 1426 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 ZNF629Q9UEG4 869 aaPredicted RBP0.68□□□□□ -2.3
UBXN4-207ENST00000471246 OR12D3Q9UGF7 316 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 TRAF3IP3Q9Y228 551 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 HEBP2Q9Y5Z4 205 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 CHD8Q9HCK8 2581 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 SRCAPQ6ZRS2 3230 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 USP24Q9UPU5 2620 aa0.68□□□□□ -2.3
UBXN4-207ENST00000471246 RP1L1Q8IWN7 2480 aaPredicted RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 SCN1AP35498 2009 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 FRMPD4Q14CM0 1322 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 IGLV11-55A0A075B6I3 123 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 TRAV40A0A0B4J280 105 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 KIR2DS1A0A191URI9 304 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 A0A1B0GUS0 222 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 RBMY1BA6NDE4 496 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 RBMY1EA6NEQ0 496 aaKnown RBP0.67□□□□□ -2.3
UBXN4-207ENST00000471246 TRDCB7Z8K6 153 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 HIP1O00291 1037 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 DCTN6O00399 190 aa0.67□□□□□ -2.3
UBXN4-207ENST00000471246 CLDN5O00501 218 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms