RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 BCL2L2Q92843 193 aaPredicted RBP10.57□□□□□ -0.72
UBR4-211ENST00000467272 ZNF385AQ96PM9 386 aaKnown RBP10.57□□□□□ -0.72
UBR4-211ENST00000467272 SF3B5Q9BWJ5 86 aaKnown RBP10.57□□□□□ -0.72
UBR4-211ENST00000467272 RACGAP1Q9H0H5 632 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 ZNF442Q9H7R0 627 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 SEC61A2Q9H9S3 476 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 POLE3Q9NRF9 147 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 ATAD3AQ9NVI7 634 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 OSGIN1Q9UJX0 560 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 PCDHGB4Q9UN71 923 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 SLC35A3Q9Y2D2 325 aa10.57□□□□□ -0.72
UBR4-211ENST00000467272 TMEM72A0PK05 275 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 ZC3H12DA2A288 527 aaKnown RBP10.56□□□□□ -0.72
UBR4-211ENST00000467272 TMEM114B3SHH9 223 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 KLF11O14901 512 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 CHRNGP07510 517 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 CECR9P0C854 216 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 DAOP14920 347 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 MATN1P21941 496 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 ARFIP2P53365 341 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 NAAAQ02083 359 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 TRIP10Q15642 601 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 WHAMMP3Q1A5X7 153 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 TBRG1Q3YBR2 411 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 SPDYE7PQ495Y7 208 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 BHLHB9Q6PI77 547 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 SLC46A3Q7Z3Q1 461 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 MYPOPQ86VE0 399 aaPredicted RBP10.56□□□□□ -0.72
UBR4-211ENST00000467272 HOMEZQ8IX15 550 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 POMGNT2Q8NAT1 580 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 OR9K2Q8NGE7 335 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 OR1K1Q8NGR3 316 aa10.56□□□□□ -0.72
UBR4-211ENST00000467272 ZNF317Q96PQ6 595 aaPredicted RBP10.56□□□□□ -0.72
UBR4-211ENST00000467272 VRK1Q99986 396 aaPredicted RBP10.56□□□□□ -0.72
UBR4-211ENST00000467272 HEATR1Q9H583 2144 aaKnown RBP10.56□□□□□ -0.72
UBR4-211ENST00000467272 FBXO9Q9UK97 447 aaPredicted RBP10.56□□□□□ -0.72
UBR4-211ENST00000467272 NOTCH1P46531 2555 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 NUP214P35658 2090 aaPredicted RBP10.55□□□□□ -0.72
UBR4-211ENST00000467272 TMED7-TICAM2A0A0A6YYA0 188 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 LIPT2A6NK58 231 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 AQP7P3A6NL99 342 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 CLDN24A6NM45 220 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 AP3D1O14617 1153 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 CYP7B1O75881 506 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 PRPS1L1P21108 318 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 APEX1P27695 318 aaKnown RBP10.55□□□□□ -0.72
UBR4-211ENST00000467272 MAPK1P28482 360 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 HTR3AP46098 478 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 CCT5P48643 541 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 OR2B6P58173 313 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 KCNJ10P78508 379 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 ATP6AP1LQ52LC2 224 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 SPATA19Q7Z5L4 167 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 CLECL1Q8IZS7 167 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 CLEC4FQ8N1N0 589 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 ZCCHC24Q8N2G6 241 aaKnown RBP10.55□□□□□ -0.72
UBR4-211ENST00000467272 OR4F15Q8NGB8 312 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 SGMS2Q8NHU3 365 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 NEU4Q8WWR8 484 aaPredicted RBP10.55□□□□□ -0.72
UBR4-211ENST00000467272 CNOT9Q92600 299 aaKnown RBP10.55□□□□□ -0.72
UBR4-211ENST00000467272 ZMYND19Q96E35 227 aaPredicted RBP10.55□□□□□ -0.72
UBR4-211ENST00000467272 DNAJA3Q96EY1 480 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 PPP3R2Q96LZ3 170 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 RAB1BQ9H0U4 201 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 ASIC5Q9NY37 505 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 UPB1Q9UBR1 384 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 TBK1Q9UHD2 729 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 TMED7Q9Y3B3 224 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 SPEF1Q9Y4P9 236 aa10.55□□□□□ -0.72
UBR4-211ENST00000467272 DYSFO75923 2080 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 TMEM229AB2RXF0 380 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 NPHS1O60500 1241 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 TRIM13O60858 407 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 FZD7O75084 574 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 PEX11AO75192 247 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 CHEK2O96017 543 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 CRYAAP02489 173 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 FAM153BP0C7A2 387 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 HOXB1P14653 301 aaPredicted RBP10.54□□□□□ -0.72
UBR4-211ENST00000467272 RYKP34925 604 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 THBS4P35443 961 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 SLC1A3P43003 542 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 IDH2P48735 452 aaKnown RBP10.54□□□□□ -0.72
UBR4-211ENST00000467272 LGALS3BPQ08380 585 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 CARTPTQ16568 116 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 MSMPQ1L6U9 139 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 FAM153CQ494X1 144 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 IL23RQ5VWK5 629 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 UGT2A3Q6UWM9 527 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 USP43Q70EL4 1123 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 TMEM99Q8N816 258 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 ANKK1Q8NFD2 765 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 FAM216AQ8WUB2 273 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 PMM1Q92871 262 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 SNX18Q96RF0 628 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 C1orf50Q9BV19 199 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 OR51I1Q9H343 314 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 TMEM45AQ9NWC5 275 aa10.54□□□□□ -0.72
UBR4-211ENST00000467272 METRNQ9UJH8 293 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms