RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TROVE2P10155 538 aaKnown RBP eCLIP17.37■□□□□ 0.37
VARS-221ENST00000463184 NTF4P34130 210 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 MAGEA8P43361 318 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 CLNS1AP54105 237 aaKnown RBP17.37■□□□□ 0.37
VARS-221ENST00000463184 CHRNB3Q05901 458 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 PGS1Q32NB8 556 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 AP1ARQ63HQ0 302 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 B3GLCTQ6Y288 498 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 GRINAQ7Z429 371 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 MIPOL1Q8TD10 442 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 C10orf105Q8TEF2 133 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 HTRA1Q92743 480 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 THOC1Q96FV9 657 aaKnown RBP17.37■□□□□ 0.37
VARS-221ENST00000463184 ARL5BQ96KC2 179 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 ZNF317Q96PQ6 595 aaPredicted RBP17.37■□□□□ 0.37
VARS-221ENST00000463184 OR51I1Q9H343 314 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 POLE3Q9NRF9 147 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 DCTN4Q9UJW0 460 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 TRAPPC4Q9Y296 219 aa17.37■□□□□ 0.37
VARS-221ENST00000463184 YLPM1P49750 1951 aaKnown RBP17.37■□□□□ 0.37
VARS-221ENST00000463184 RNF103-CHMP3A0A140T963 221 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 RNASET2O00584 256 aaKnown RBP17.36■□□□□ 0.37
VARS-221ENST00000463184 KIAA0513O60268 411 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 ITGA5P08648 1049 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 EFNA4P52798 201 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 MAPK14Q16539 360 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 PDCD4Q53EL6 469 aaKnown RBP17.36■□□□□ 0.37
VARS-221ENST00000463184 C1QTNF12Q5T7M4 302 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 ATAD3BQ5T9A4 648 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 OLIG3Q7RTU3 272 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 CCDC103Q8IW40 242 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 CLECL1Q8IZS7 167 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 TESCQ96BS2 214 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 AMBRA1Q9C0C7 1298 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 SHARPINQ9H0F6 387 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 FKRPQ9H9S5 495 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 PARPBPQ9NWS1 579 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 PCDHGB4Q9UN71 923 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 PMF1-BGLAPU3KQ54 211 aa17.36■□□□□ 0.37
VARS-221ENST00000463184 A0A0G2JND7 137 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 E9PBE3 544 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 PDLIM1O00151 329 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 USF1P22415 310 aaPredicted RBP17.35■□□□□ 0.37
VARS-221ENST00000463184 APOBEC3AP31941 199 aaPredicted RBP17.35■□□□□ 0.37
VARS-221ENST00000463184 RYKP34925 604 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 THBS2P35442 1172 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 FOXG1P55316 489 aaPredicted RBP17.35■□□□□ 0.37
VARS-221ENST00000463184 NME5P56597 212 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 UFM1P61960 85 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 H3F3AP84243 136 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 DPY19L1Q2PZI1 675 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 OR4F3Q6IEY1 312 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 TYW3Q6IPR3 259 aaKnown RBP17.35■□□□□ 0.37
VARS-221ENST00000463184 ADGRG3Q86Y34 549 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 CLEC4FQ8N1N0 589 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 C17orf78Q8N4C9 275 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 WDR31Q8NA23 367 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 C1orf162Q8NEQ5 155 aaPredicted RBP17.35■□□□□ 0.37
VARS-221ENST00000463184 XAGE5Q8WWM1 108 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 C1QTNF6Q9BXI9 259 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 SAP130Q9H0E3 1048 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 FAM53CQ9NYF3 392 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 ZIM2Q9NZV7 527 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 TMEM181Q9P2C4 612 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 UPB1Q9UBR1 384 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 AMDHD2Q9Y303 409 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 WDR45Q9Y484 360 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 ATP23Q9Y6H3 246 aa17.35■□□□□ 0.37
VARS-221ENST00000463184 EIF1BO60739 113 aaKnown RBP17.34■□□□□ 0.37
VARS-221ENST00000463184 OR12D1P0DN82 309 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 IGHV4-31P0DP07 118 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 HTR3AP46098 478 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 MRPL19P49406 292 aaKnown RBP17.34■□□□□ 0.37
VARS-221ENST00000463184 OR2B6P58173 313 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 KCNJ10P78508 379 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 LSM11P83369 360 aaKnown RBP eCLIP17.34■□□□□ 0.371e-6■□□□□ 10.4
VARS-221ENST00000463184 TGFBR3Q03167 851 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 CASP12Q6UXS9 341 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 GLB1L3Q8NCI6 653 aaPredicted RBP17.34■□□□□ 0.37
VARS-221ENST00000463184 OR8J2Q8NGG1 315 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 OR52E4Q8NGH9 312 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 OR4A15Q8NGL6 344 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 ZBTB18Q99592 522 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 OR11A1Q9GZK7 315 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 HEATR1Q9H583 2144 aaKnown RBP17.34■□□□□ 0.37
VARS-221ENST00000463184 EXOSC3Q9NQT5 275 aaKnown RBP17.34■□□□□ 0.37
VARS-221ENST00000463184 SDR39U1Q9NRG7 319 aaPredicted RBP17.34■□□□□ 0.37
VARS-221ENST00000463184 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.34■□□□□ 0.37
VARS-221ENST00000463184 SLC9A8Q9Y2E8 581 aa17.34■□□□□ 0.37
VARS-221ENST00000463184 LMX1BO60663 402 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 BCAS1O75363 584 aaPredicted RBP17.33■□□□□ 0.36
VARS-221ENST00000463184 SLC22A3O75751 556 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 UQCRC2P22695 453 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 GYS2P54840 703 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 STX1BP61266 288 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 SLC35A1P78382 337 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 CGB2Q6NT52 195 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 MIER2Q8N344 545 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 PMM1Q92871 262 aa17.33■□□□□ 0.36
VARS-221ENST00000463184 ROPN1LQ96C74 230 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms