RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 OR10H4Q8NGA5 316 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 OR52M1Q8NGK5 317 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 OR4D5Q8NGN0 318 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 OR1F12Q8NHA8 337 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 RLN3Q8WXF3 142 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 CTNNBL1Q8WYA6 563 aaPredicted RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 EMG1Q92979 244 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 TTC28Q96AY4 2481 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 TECTBQ96PL2 329 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 PLEKHF1Q96S99 279 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 TXN2Q99757 166 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 MAPKAP1Q9BPZ7 522 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 SLC35A5Q9BS91 424 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 NIPSNAP3BQ9BS92 247 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 CRACR2AQ9BSW2 395 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 NMUR2Q9GZQ4 415 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 NAT10Q9H0A0 1025 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 ZNF385DQ9H6B1 395 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 RAB18Q9NP72 206 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 SLC17A5Q9NRA2 495 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 AATFQ9NY61 560 aaKnown RBP eCLIP2.38□□□□□ -2.03
RFC4-211ENST00000460408 IL17CQ9P0M4 197 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 PIPOXQ9P0Z9 390 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 WARS2Q9UGM6 360 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 TBK1Q9UHD2 729 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 PCSK1NQ9UHG2 260 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 MRPS7Q9Y2R9 242 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 AK6Q9Y3D8 172 aaKnown RBP2.38□□□□□ -2.03
RFC4-211ENST00000460408 MAD1L1Q9Y6D9 718 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 CASP8AP2Q9UKL3 1982 aa2.38□□□□□ -2.03
RFC4-211ENST00000460408 LMTK2Q8IWU2 1503 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 KDRP35968 1356 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 COL24A1Q17RW2 1714 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 PARP4Q9UKK3 1724 aaKnown RBP2.37□□□□□ -2.03
RFC4-211ENST00000460408 SZT2Q5T011 3432 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 BCL9O00512 1426 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 SPATA31E1Q6ZUB1 1445 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 LRP5LA4QPB2 252 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TUBAL3A6NHL2 446 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 VSTM2BA6NLU5 285 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 CPLX1O14810 134 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 MAGEB3O15480 346 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 RS1O15537 224 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TBL1XO60907 577 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 GNA14O95837 355 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TIMP1P01033 207 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 DNAH10OSP0CZ25 163 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 PTMSP20962 102 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 IFNAR2P48551 515 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 HNRNPA3P51991 378 aaKnown RBP2.37□□□□□ -2.03
RFC4-211ENST00000460408 RPS14P62263 151 aaKnown RBP2.37□□□□□ -2.03
RFC4-211ENST00000460408 C1orf61Q13536 156 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 ZNF79Q15937 498 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 CCDC152Q4G0S7 254 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 CFAP221Q4G0U5 840 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TP53I3Q53FA7 332 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 C10orf120Q5SQS8 335 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 SPATA46Q5T0L3 261 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 ATAD3BQ5T9A4 648 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 ATF7IP2Q5U623 682 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 SCARA5Q6ZMJ2 495 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 LCA5Q86VQ0 697 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TPRA1Q86W33 373 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 ARL6IP6Q8N6S5 226 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 BBS1Q8NFJ9 593 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 OR4D9Q8NGE8 314 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 LINC01006Q8NI28 216 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 PIGCQ92535 297 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 NEIL2Q969S2 332 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 C16orf74Q96GX8 76 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TTC25Q96NG3 672 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TGM7Q96PF1 710 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 EDEM2Q9BV94 578 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 SPATA16Q9BXB7 569 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 TEX13BQ9BXU2 312 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 NXF5Q9H1B4 397 aaKnown RBP2.37□□□□□ -2.03
RFC4-211ENST00000460408 PLSCR3Q9NRY6 295 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 UFSP2Q9NUQ7 469 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 NUDT15Q9NV35 164 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 IL36GQ9NZH8 169 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 UBQLN1Q9UMX0 589 aaKnown RBP2.37□□□□□ -2.03
RFC4-211ENST00000460408 SNX6Q9UNH7 406 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 ABCG2Q9UNQ0 655 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 MBD5Q9P267 1494 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 SBF2Q86WG5 1849 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 PIK3C2AO00443 1686 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 GCC2Q8IWJ2 1684 aa2.37□□□□□ -2.03
RFC4-211ENST00000460408 PAPPAQ13219 1627 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 TRPM1Q7Z4N2 1603 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 H0YCG3 227 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 PRRG1O14668 218 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 HAT1O14929 419 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 ARPC3O15145 178 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 GMFGO60234 142 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 TPST2O60704 377 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 HCN1O60741 890 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 ECI2O75521 394 aa2.36□□□□□ -2.03
RFC4-211ENST00000460408 SLITRK3O94933 977 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms