RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ATP1B1P05026 303 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 ELK1P19419 428 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 F8A1P23610 371 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 ATP12AP54707 1039 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 SLC35D2Q76EJ3 337 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 PRSS45Q7RTY3 260 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF676Q8N7Q3 588 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 BCORP1Q8N888 145 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 THAP4Q8WY91 577 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 PRSS27Q9BQR3 290 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 MIXL1Q9H2W2 232 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 FSCN3Q9NQT6 498 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 SLC2A4RGQ9NR83 387 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 COPS7AQ9UBW8 275 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 POMT2Q9UKY4 750 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 PLCL2Q9UPR0 1127 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 VDAC3Q9Y277 283 aa11.01□□□□□ -0.65
SMPD4-213ENST00000454468 SERINC4A6NH21 518 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 POLR1CO15160 346 aaPredicted RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 CTNSO60931 367 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 GDI2P50395 445 aaKnown RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 TEKQ02763 1124 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 PLCXD2Q0VAA5 305 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 GAS6Q14393 721 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF79Q15937 498 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 SLC25A35Q3KQZ1 300 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 XKRXQ6PP77 449 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 QSOX2Q6ZRP7 698 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 SSX6Q7RTT6 188 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 MARCH3Q86UD3 253 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 RDH10Q8IZV5 341 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ABHD4Q8TB40 342 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 CNN2Q99439 309 aaKnown RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 CUTCQ9NTM9 273 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ACOXLQ9NUZ1 547 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 TBC1D24Q9ULP9 559 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 PTPRZ1P23471 2315 aaPredicted RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 SHISA3A0PJX4 238 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 SOX1O00570 391 aaPredicted RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 CFIP05156 583 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 TPBGQ13641 420 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 SFRP4Q6FHJ7 346 aaPredicted RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 ARHGAP11AQ6P4F7 1023 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 SMRP1Q8NCR6 262 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 CEP76Q8TAP6 659 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ZDHHC12Q96GR4 267 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 C5orf34Q96MH7 638 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ULBP3Q9BZM4 244 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 SRRQ9GZT4 340 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 C14orf105Q9NVL8 296 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 A0A1B0GTH9 108 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 KDM4EB2RXH2 506 aaPredicted RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 LYRM1O43325 122 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 CHP2O43745 196 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 CRYZL1O95825 349 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 RAB3BP20337 219 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ADH7P40394 386 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 HNRNPKP61978 463 aaKnown RBP eCLIP11□□□□□ -0.65
SMPD4-213ENST00000454468 ALG10Q5BKT4 473 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 PRAMEF8Q5VWM4 474 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 PRAMEF7Q5VXH5 474 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 KANSL1Q7Z3B3 1105 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 SLC35F2Q8IXU6 374 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF527Q8NB42 609 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 TSEN15Q8WW01 171 aaKnown RBP11□□□□□ -0.65
SMPD4-213ENST00000454468 NKD1Q969G9 470 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 TM4SF19Q96DZ7 209 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 ZC4H2Q9NQZ6 224 aa11□□□□□ -0.65
SMPD4-213ENST00000454468 PTPRSQ13332 1948 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 INMT-MINDY4F8WBC2 141 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 FLRT2O43155 660 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 SSNA1O43805 119 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TOXO94900 526 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 AK1P00568 194 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 THBS1P07996 1170 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TACR3P29371 465 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 RACK1P63244 317 aaKnown RBP10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TOMM20Q15388 145 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 LPAL2Q16609 132 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TATDN3Q17R31 274 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 ATAD3CQ5T2N8 411 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 BCL2L15Q5TBC7 163 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 HEPHL1Q6MZM0 1159 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 COMMD2Q86X83 199 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM246Q9BRR3 403 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-213ENST00000454468 CHIAQ9BZP6 476 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 FGF20Q9NP95 211 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-213ENST00000454468 CMC2Q9NRP2 79 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 COQ3Q9NZJ6 369 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM184BQ9Y519 407 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-213ENST00000454468 CNOT1A5YKK6 2376 aaKnown RBP10.99□□□□□ -0.65
SMPD4-213ENST00000454468 H3BML4 177 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 ICMTO60725 284 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 NGFRP08138 427 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 GPR143P51810 404 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TMPRSS9Q7Z410 1059 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 OR4M1Q8NGD0 313 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 ZPLD1Q8TCW7 415 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms