RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 FAM69BQ5VUD6 431 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 TUBA3EQ6PEY2 450 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 FAM131AQ6UXB0 335 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 OR5W2Q8NH69 310 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 ZNRF4Q8WWF5 429 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 ASB15Q8WXK1 588 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 DIRAS2Q96HU8 199 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 TSSK2Q96PF2 358 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 CTRCQ99895 268 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 ASB6Q9NWX5 421 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 PLEKHB1Q9UF11 243 aaPredicted RBP10.76□□□□□ -0.69
VTA1-203ENST00000452973 MRTO4Q9UKD2 239 aaKnown RBP10.76□□□□□ -0.69
VTA1-203ENST00000452973 CMAHPQ9Y471 501 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 A0A075B6Q4 140 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 A0A1W2PPK0 400 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 SHISA3A0PJX4 238 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 J3QRE1 110 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 WISP1O95388 367 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 GALNSP34059 522 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 RPS5P46782 204 aaKnown RBP10.76□□□□□ -0.69
VTA1-203ENST00000452973 ZNF117Q03924 483 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 GALEQ14376 348 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 TMEM71Q6P5X7 295 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 PMEPA1Q969W9 287 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 OMA1Q96E52 524 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 KTI12Q96EK9 354 aaPredicted RBP10.76□□□□□ -0.69
VTA1-203ENST00000452973 Q96M85 177 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 TIMP4Q99727 224 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 WWTR1Q9GZV5 400 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 HOXD1Q9GZZ0 328 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 ZNF768Q9H5H4 540 aaKnown RBP10.76□□□□□ -0.69
VTA1-203ENST00000452973 ERVMER34-1Q9H9K5 563 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 SLC22A11Q9NSA0 550 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 CHRNA9Q9UGM1 479 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 ZNF337Q9Y3M9 751 aa10.76□□□□□ -0.69
VTA1-203ENST00000452973 OR7A10O76100 309 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 PSPHP78330 225 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 BIKQ13323 160 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 TAB1Q15750 504 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ZNF181Q2M3W8 571 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 PHF19Q5T6S3 580 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 VASNQ6EMK4 673 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 PWWP2BQ6NUJ5 590 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 GAREM1Q9H706 876 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 TRIM36Q9NQ86 728 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 PCNX3Q9H6A9 2034 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 TEX13CA0A0J9YWL9 993 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 TTC36A6NLP5 189 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 H7C1C5 153 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 RNF13O43567 381 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 CDC40O60508 579 aaKnown RBP eCLIP10.75□□□□□ -0.69
VTA1-203ENST00000452973 PPM1BO75688 479 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 MT-ND5P03915 603 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ABCD3P28288 659 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 LCN6P62502 163 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 LPAL2Q16609 132 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ZSWIM7Q19AV6 140 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 C1QL3Q5VWW1 255 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 PRSS42Q7Z5A4 293 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ZNF440Q8IYI8 595 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 UBALD2Q8IYN6 164 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 DRAXINQ8NBI3 349 aaPredicted RBP10.75□□□□□ -0.69
VTA1-203ENST00000452973 C17orf47Q8NEP4 570 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 OR1N1Q8NGS0 311 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 OR5J2Q8NH18 312 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 SLC25A36Q96CQ1 311 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 EVA1AQ9H8M9 152 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 APMAPQ9HDC9 416 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ISYNA1Q9NPH2 558 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 BAIAP2Q9UQB8 552 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 TRDV1A0A1B0GX56 115 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 OR6C68A6NDL8 312 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 SSX4O60224 188 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 SELENOFO60613 162 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 SCRG1O75711 98 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 GUSBP08236 651 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 SPNP16150 400 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 RAB15P59190 212 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ZNF85Q03923 595 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 PON3Q15166 354 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 FNDC7Q5VTL7 733 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 LEG1Q6P5S2 330 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ATG4DQ86TL0 474 aaPredicted RBP10.75□□□□□ -0.69
VTA1-203ENST00000452973 OR13C5Q8NGS8 318 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 OR14A16Q8NHC5 309 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 ATOH1Q92858 354 aaPredicted RBP10.75□□□□□ -0.69
VTA1-203ENST00000452973 SDHCQ99643 169 aaPredicted RBP10.75□□□□□ -0.69
VTA1-203ENST00000452973 RPRD1BQ9NQG5 326 aaKnown RBP10.75□□□□□ -0.69
VTA1-203ENST00000452973 ICAM5Q9UMF0 924 aa10.75□□□□□ -0.69
VTA1-203ENST00000452973 A0A1W2PRG6 482 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 IDSB3KWA1 339 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 TFP02787 698 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 HEXBP07686 556 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 SLC2A5P22732 501 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 CTXN1P60606 82 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 EGR4Q05215 589 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 NR0B2Q15466 257 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 NKAIN1Q4KMZ8 207 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 TMEM91Q6ZNR0 172 aa10.74□□□□□ -0.69
VTA1-203ENST00000452973 SLITRK4Q8IW52 837 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms