RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 MATN1P21941 496 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 MAPK1P28482 360 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 THBS4P35443 961 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 PGM1P36871 562 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 DNAJB13P59910 316 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 IL1RL1Q01638 556 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 ARHGAP11BQ3KRB8 267 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 LIPMQ5VYY2 423 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 FAHD2BQ6P2I3 314 aaPredicted RBP12.87□□□□□ -0.35
MRPL40-202ENST00000443660 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 C16orf62Q7Z3J2 963 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 OR1K1Q8NGR3 316 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 OR5AK3PQ8NH89 298 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 IFT81Q8WYA0 676 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 FAHD2AQ96GK7 314 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 HEATR1Q9H583 2144 aaKnown RBP12.87□□□□□ -0.35
MRPL40-202ENST00000443660 EXD2Q9NVH0 621 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 USP22Q9UPT9 525 aa12.87□□□□□ -0.35
MRPL40-202ENST00000443660 ARFGEF3Q5TH69 2177 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 ZNF587BE7ETH6 402 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 LYNX1G3V0Z9 82 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 LSM1O15116 133 aaKnown RBP12.86□□□□□ -0.35
MRPL40-202ENST00000443660 MSMBP08118 114 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 ADRA2AP08913 450 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 CECR9P0C854 216 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 LYNX1P0DP58 116 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 IDH2P48735 452 aaKnown RBP12.86□□□□□ -0.35
MRPL40-202ENST00000443660 OTUD3Q5T2D3 398 aaPredicted RBP12.86□□□□□ -0.35
MRPL40-202ENST00000443660 PAQR6Q6TCH4 344 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 CKAP2Q8WWK9 683 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 OIT3Q8WWZ8 545 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 ZNF317Q96PQ6 595 aaPredicted RBP12.86□□□□□ -0.35
MRPL40-202ENST00000443660 LRRC37BQ96QE4 947 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 SF3B5Q9BWJ5 86 aaKnown RBP12.86□□□□□ -0.35
MRPL40-202ENST00000443660 ZNF696Q9H7X3 374 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
MRPL40-202ENST00000443660 CRNNQ9UBG3 495 aaPredicted RBP12.86□□□□□ -0.35
MRPL40-202ENST00000443660 TMED7-TICAM2A0A0A6YYA0 188 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 ARPC4-TTLL3A0A0A6YYG9 625 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 NR5A2O00482 541 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 ZNF208O43345 1280 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 LGI1O95970 557 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 IMPDH2P12268 514 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
MRPL40-202ENST00000443660 CALCRP30988 508 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 SOAT1P35610 550 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 GPR6P46095 362 aaPredicted RBP12.85□□□□□ -0.35
MRPL40-202ENST00000443660 MAP2K6P52564 334 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 RPS26P62854 115 aaKnown RBP12.85□□□□□ -0.35
MRPL40-202ENST00000443660 DEFA6Q01524 100 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 HGFACQ04756 655 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 FAM153CQ494X1 144 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 AWAT1Q58HT5 328 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 ATAD3BQ5T9A4 648 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 TMEM225Q6GV28 225 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 SHISA2Q6UWI4 295 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 RNF165Q6ZSG1 346 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 ZNF572Q7Z3I7 529 aaPredicted RBP12.85□□□□□ -0.35
MRPL40-202ENST00000443660 C6orf120Q7Z4R8 191 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 DDIASQ8IXT1 998 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 FAM169BQ8N8A8 192 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 ZIC4Q8N9L1 334 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 CCDC63Q8NA47 563 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 OR9K2Q8NGE7 335 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 OR51F2Q8NH61 342 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 BCL2L2Q92843 193 aaPredicted RBP12.85□□□□□ -0.35
MRPL40-202ENST00000443660 ZNF350Q9GZX5 532 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 PIF1Q9H611 641 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 EMCNQ9ULC0 261 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 TMED7Q9Y3B3 224 aa12.85□□□□□ -0.35
MRPL40-202ENST00000443660 A0A096LPE4 126 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 A0A1W2PPZ6 126 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 TMEM129A0AVI4 362 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 GLRA3O75311 464 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 LYPLA1O75608 230 aaPredicted RBP12.84□□□□□ -0.35
MRPL40-202ENST00000443660 AGR2O95994 175 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 TFP02787 698 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 GPIP06744 558 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 CPA3P15088 417 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 EPHA1P21709 976 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 GCAP28676 217 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 POLR2HP52434 150 aaKnown RBP12.84□□□□□ -0.35
MRPL40-202ENST00000443660 ARFIP2P53365 341 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 TUBA1BP68363 451 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 TUBA4AP68366 448 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
MRPL40-202ENST00000443660 MAPK14Q16539 360 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 CCDC153Q494R4 210 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 TUBA1AQ71U36 451 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 OLIG3Q7RTU3 272 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 GPAT4Q86UL3 456 aa12.84□□□□□ -0.35
MRPL40-202ENST00000443660 FAM71CQ8NEG0 241 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms