RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 TCTEX1D2Q8WW35 142 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 VSTM2LQ96N03 204 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 CCNL2Q96S94 520 aaPredicted RBP1.29□□□□□ -2.2
LINC02541-201ENST00000427157 ZNF416Q9BWM5 594 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 DNTTIP1Q9H147 329 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 SIAEQ9HAT2 523 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 NOX3Q9HBY0 568 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 ANO10Q9NW15 660 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 TRAF3IP3Q9Y228 551 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 SPACA6W5XKT8 324 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 NLRC5Q86WI3 1866 aa1.29□□□□□ -2.2
LINC02541-201ENST00000427157 PCNX2A6NKB5 2137 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 IGHV2-70DA0A0C4DH43 119 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 PLAC8L1A1L4L8 177 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 KINO60870 393 aaKnown RBP1.28□□□□□ -2.2
LINC02541-201ENST00000427157 OPN1LWP04000 364 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 POLR2MP0CAP2 368 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 COPB2P35606 906 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 KIR3DL2P43630 455 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 ARRB1P49407 418 aaPredicted RBP1.28□□□□□ -2.2
LINC02541-201ENST00000427157 SMARCB1Q12824 385 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 RPA4Q13156 261 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 LASP1Q14847 261 aaKnown RBP1.28□□□□□ -2.2
LINC02541-201ENST00000427157 TAF9Q16594 264 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 TIGD3Q6B0B8 471 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 ATL3Q6DD88 541 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 LYPD2Q6UXB3 125 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 WDR88Q6ZMY6 472 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 ZNF571Q7Z3V5 609 aaPredicted RBP1.28□□□□□ -2.2
LINC02541-201ENST00000427157 TMEM17Q86X19 198 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 FTMTQ8N4E7 242 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 C15orf56Q8N910 161 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 OR4F15Q8NGB8 312 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 URGCPQ8TCY9 931 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 RGP1Q92546 391 aaPredicted RBP1.28□□□□□ -2.2
LINC02541-201ENST00000427157 CLCF1Q9UBD9 225 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 PCYOX1Q9UHG3 505 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 STRAPQ9Y3F4 350 aaKnown RBP1.28□□□□□ -2.2
LINC02541-201ENST00000427157 SLC25A15Q9Y619 301 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 SH3TC1Q8TE82 1336 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 ATP10DQ9P241 1426 aa1.28□□□□□ -2.2
LINC02541-201ENST00000427157 RPGRIP1LQ68CZ1 1315 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 A8MUU9 505 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 MBTPS2O43462 519 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 SRP72O76094 671 aaKnown RBP1.27□□□□□ -2.21
LINC02541-201ENST00000427157 VAMP5O95183 116 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 IGF1P05019 195 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 TCN2P20062 427 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 ATP6AP1Q15904 470 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 SPIN3Q5JUX0 258 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 C12orf60Q5U649 245 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 MINDY2Q8NBR6 621 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 NANPQ8TBE9 248 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 SRMSQ9H3Y6 488 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 RHOJQ9H4E5 214 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 RDH8Q9NYR8 311 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 ATP6V1HQ9UI12 483 aa1.27□□□□□ -2.21
LINC02541-201ENST00000427157 CLSPNQ9HAW4 1339 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 A0A1W2PP18 115 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 K7EM74 188 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 LINC00869P0C866 280 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 BTCP35070 178 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 GLP1RP43220 463 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 MAPK6Q16659 721 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 MARCH8Q5T0T0 291 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 TPRA1Q86W33 373 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 KIR3DL3Q8N743 410 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 PNPT1Q8TCS8 783 aaKnown RBP1.26□□□□□ -2.21
LINC02541-201ENST00000427157 TM4SF19Q96DZ7 209 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 OR2A5Q96R48 311 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 SUDS3Q9H7L9 328 aaPredicted RBP1.26□□□□□ -2.21
LINC02541-201ENST00000427157 FOLH1BQ9HBA9 442 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 MID1IP1Q9NPA3 183 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 ZNF355PQ9NSJ1 428 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 FOXJ3Q9UPW0 622 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 FRMPD3Q5JV73 1810 aa1.26□□□□□ -2.21
LINC02541-201ENST00000427157 ARHGAP42A6NI28 874 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 DCTN6O00399 190 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 PEX7O00628 323 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 B3GAT3O94766 335 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 CA1P00915 261 aaPredicted RBP1.25□□□□□ -2.21
LINC02541-201ENST00000427157 POU2F1P14859 743 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 PTGDSP41222 190 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 HMGCS1Q01581 520 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 SLC39A6Q13433 755 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 RIPK1Q13546 671 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 LINC01620Q4KN68 170 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 SYT10Q6XYQ8 523 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 RNF148Q8N7C7 305 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 PINX1Q96BK5 328 aaKnown RBP1.25□□□□□ -2.21
LINC02541-201ENST00000427157 HPDLQ96IR7 371 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 TESK2Q96S53 571 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 TMEM246Q9BRR3 403 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 ATG10Q9H0Y0 220 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 SMYD3Q9H7B4 428 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 QPCTLQ9NXS2 382 aa1.25□□□□□ -2.21
LINC02541-201ENST00000427157 MRPS33Q9Y291 106 aaKnown RBP1.25□□□□□ -2.21
LINC02541-201ENST00000427157 ABCC4O15439 1325 aa1.24□□□□□ -2.21
LINC02541-201ENST00000427157 RBFOX2O43251 390 aaKnown RBP eCLIP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms