RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 OTX2P32243 289 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 LIMK1P53667 647 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 MLF1P58340 268 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 NHLH1Q02575 133 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 LTBQ06643 244 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 H3F3CQ6NXT2 135 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 C5orf46Q6UWT4 87 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 SLC16A12Q6ZSM3 486 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 CXXC5Q7LFL8 322 aaKnown RBP13.8□□□□□ -0.2
ACTB-204ENST00000425660 ZNF367Q7RTV3 350 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 CPOQ8IVL8 374 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 GID4Q8IVV7 300 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 OR52I1Q8NGK6 324 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 LGALS12Q96DT0 336 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 TAPBPLQ9BX59 468 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 METTL7AQ9H8H3 244 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 FKRPQ9H9S5 495 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 GPN2Q9H9Y4 310 aaPredicted RBP13.8□□□□□ -0.2
ACTB-204ENST00000425660 SH2D2AQ9NP31 389 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 TAS2R16Q9NYV7 291 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 ENPP5Q9UJA9 477 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 ZNF229Q9UJW7 825 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 FBXL4Q9UKA2 621 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 KNTC1P50748 2209 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 ZNF292O60281 2723 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 TRAV36DV7A0A075B6V5 113 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 TMED7-TICAM2A0A0A6YYA0 188 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 MCIDASD6RGH6 385 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 STMND1H3BQB6 276 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 M0R082 166 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 GABARAPO95166 117 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 PPP1R3DO95685 299 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 APEHP13798 732 aaKnown RBP13.79□□□□□ -0.2
ACTB-204ENST00000425660 Q0VFX4 171 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 SLC35F1Q5T1Q4 408 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 OR5M10Q6IEU7 315 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 RPS19BP1Q86WX3 136 aaKnown RBP13.79□□□□□ -0.2
ACTB-204ENST00000425660 ERI1Q8IV48 349 aaKnown RBP13.79□□□□□ -0.2
ACTB-204ENST00000425660 STK35Q8TDR2 534 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 PTP4A1Q93096 173 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 TAAR8Q969N4 342 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 RNFT2Q96EX2 444 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 PTDSS2Q9BVG9 487 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 P4HTMQ9NXG6 502 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 LSM2Q9Y333 95 aaKnown RBP13.79□□□□□ -0.2
ACTB-204ENST00000425660 TMED7Q9Y3B3 224 aa13.79□□□□□ -0.2
ACTB-204ENST00000425660 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 RIIAD1A6NNX1 92 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 A8MVM7 634 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 IDH3BO43837 385 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 SUSD5O60279 629 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 RAD1O60671 282 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 RAB36O95755 333 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 MT-ATP6P00846 226 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 ZNF3P17036 446 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 HK1P19367 917 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 DLSTP36957 453 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 TGFBR2P37173 567 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 SSR4P51571 173 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 MAP2K6P52564 334 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 TMED1Q13445 227 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 CTF1Q16619 201 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 TIGD6Q17RP2 521 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 SLC25A53Q5H9E4 307 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 NIPAL3Q6P499 406 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 PLBD1Q6P4A8 553 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 TMPRSS12Q86WS5 348 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 LRRC75AQ8NAA5 344 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 PROKR2Q8NFJ6 384 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 BBS1Q8NFJ9 593 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 CDCP1Q9H5V8 836 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 MED11Q9P086 117 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 PPP4R1LQ9P1A2 415 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 ERGIC3Q9Y282 383 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 EXOGQ9Y2C4 368 aaKnown RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 HRH3Q9Y5N1 445 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 PTPRZ1P23471 2315 aaPredicted RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 TMEM72A0PK05 275 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 ZC3H12DA2A288 527 aaKnown RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 M0R3G1 203 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 SLC25A12O75746 678 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 ATE1O95260 518 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 IFNGP01579 166 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 BGLAPP02818 100 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 SERPINA7P05543 415 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 NOS3P29474 1203 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 LIPAP38571 399 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 APOBEC1P41238 236 aaKnown RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 RPS5P46782 204 aaKnown RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 SH3BGRP55822 239 aaPredicted RBP13.78□□□□□ -0.2
ACTB-204ENST00000425660 ITGADQ13349 1161 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 IL10RAQ13651 578 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 ARMC4Q5T2S8 1044 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 FAM69AQ5T7M9 428 aa13.78□□□□□ -0.2
ACTB-204ENST00000425660 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms