RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ARHGAP11AQ6P4F7 1023 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 OPN5Q6U736 354 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 IL20RBQ6UXL0 311 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 RPS19BP1Q86WX3 136 aaKnown RBP23.26■■□□□ 1.31
CPNE1-205ENST00000401607 MOSPD2Q8NHP6 518 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 RAB2BQ8WUD1 216 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 TMEM234Q8WY98 164 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 ST8SIA1Q92185 356 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 NPAS1Q99742 590 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 HCAR1Q9BXC0 346 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 GPR87Q9BY21 358 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 MED20Q9H944 212 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 FGF20Q9NP95 211 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-205ENST00000401607 CFAP54Q96N23 3096 aa23.26■■□□□ 1.31
CPNE1-205ENST00000401607 TRIM64BA6NI03 449 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 VGLL3A8MV65 326 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 NPIPB7O75200 414 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 APOL3O95236 402 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 RAB36O95755 333 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 TGFBR2P37173 567 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 RPS5P46782 204 aaKnown RBP23.25■■□□□ 1.31
CPNE1-205ENST00000401607 DLX5P56178 289 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 TIGD6Q17RP2 521 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 C1QL3Q5VWW1 255 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 NIPAL3Q6P499 406 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 ARSKQ6UWY0 536 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 DPY19L2P2Q6ZN68 376 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 ZNF367Q7RTV3 350 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 MARCH9Q86YJ5 346 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 NACC2Q96BF6 587 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 ERMAPQ96PL5 475 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-205ENST00000401607 OR5M11Q96RB7 305 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 GPX7Q96SL4 187 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-205ENST00000401607 P4HTMQ9NXG6 502 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 PCDHGB6Q9Y5F9 930 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 CPAMD8Q8IZJ3 1885 aa23.25■■□□□ 1.31
CPNE1-205ENST00000401607 BGLAPP02818 100 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 HK1P19367 917 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 LIPAP38571 399 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 SSR4P51571 173 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 PRPS1P60891 318 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 CRMP1Q14194 572 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 LRRC75AQ8NAA5 344 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 ASB15Q8WXK1 588 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 PTP4A1Q93096 173 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 PTDSS2Q9BVG9 487 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 B3GNT4Q9C0J1 378 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 NRIP3Q9NQ35 241 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 SDHAF3Q9NRP4 125 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 LSM2Q9Y333 95 aaKnown RBP23.24■■□□□ 1.31
CPNE1-205ENST00000401607 ADAM18Q9Y3Q7 739 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 IER3IP1Q9Y5U9 82 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 TRAV36DV7A0A075B6V5 113 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 LOC101059948A0A1B0GTJ6 334 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 IRGMA1A4Y4 181 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 RIIAD1A6NNX1 92 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 TP53I11O14683 189 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 NOL3O60936 208 aaKnown RBP23.24■■□□□ 1.31
CPNE1-205ENST00000401607 SLC25A12O75746 678 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 ICAM2P13598 275 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 PAX7P23759 505 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 MSX1P28360 303 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 AQP2P41181 271 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 HTR3AP46098 478 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 CHAF1BQ13112 559 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 ITGADQ13349 1161 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 INPP5JQ15735 1006 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-205ENST00000401607 PAQR6Q6TCH4 344 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 GID4Q8IVV7 300 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 OTULINQ96BN8 352 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 FKRPQ9H9S5 495 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 ZNF229Q9UJW7 825 aa23.24■■□□□ 1.31
CPNE1-205ENST00000401607 TSPAN19P0C672 248 aa23.23■■□□□ 1.31
CPNE1-205ENST00000401607 NOS3P29474 1203 aa23.23■■□□□ 1.31
CPNE1-205ENST00000401607 UQCRC1P31930 480 aa23.23■■□□□ 1.31
CPNE1-205ENST00000401607 RPL4P36578 427 aaKnown RBP23.23■■□□□ 1.31
CPNE1-205ENST00000401607 DBPQ10586 325 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-205ENST00000401607 TMEM81Q6P7N7 255 aa23.23■■□□□ 1.31
CPNE1-205ENST00000401607 SHFQ7M4L6 423 aa23.23■■□□□ 1.31
CPNE1-205ENST00000401607 ERI1Q8IV48 349 aaKnown RBP23.23■■□□□ 1.31
CPNE1-205ENST00000401607 SLC37A3Q8NCC5 494 aa23.23■■□□□ 1.31
CPNE1-205ENST00000401607 CPNE5Q9HCH3 593 aa23.23■■□□□ 1.31
CPNE1-205ENST00000401607 H2AFY2Q9P0M6 372 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-205ENST00000401607 MRPS18BQ9Y676 258 aaKnown RBP23.23■■□□□ 1.31
CPNE1-205ENST00000401607 A8MVM7 634 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 PRR23D1E9PI22 279 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 BLOC1S5-TXNDC5H3BN57 136 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 ETV2O00321 342 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 GABARAPO95166 117 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 PRR23D2P0DMB1 279 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 HIST1H1CP16403 213 aaKnown RBP23.22■■□□□ 1.31
CPNE1-205ENST00000401607 ZNF3P17036 446 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 NR4A1P22736 598 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 CTF1Q16619 201 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 PRAMEF20Q5VT98 475 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 NANOGP1Q8N7R0 232 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 VDAC3Q9Y277 283 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 ERGIC3Q9Y282 383 aa23.22■■□□□ 1.31
CPNE1-205ENST00000401607 EXOGQ9Y2C4 368 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms