RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TRIOO75962 3097 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 UMODL1Q5DID0 1318 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 LAMC1P11047 1609 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CASTOR2A6NHX0 329 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 LILRA5A6NI73 299 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SIRPB1O00241 398 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SLC9A3R1O14745 358 aaPredicted RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 TSPAN15O95858 294 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 STSP08842 583 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NQO1P15559 274 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 ARSBP15848 533 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 AKR1D1P51857 326 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CCNG1P51959 295 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 DEFA1P59665 94 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 DEFA3P59666 94 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 PAFAH1B2P68402 229 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ITPK1Q13572 414 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SF3A2Q15428 464 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 SNAI3Q3KNW1 292 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ZNF585AQ6P3V2 769 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 Q6ZNX1 250 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SLC26A9Q7LBE3 791 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 RCOR2Q8IZ40 523 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 KIF2BQ8N4N8 673 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ZNF383Q8NA42 475 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 OR6N2Q8NGY6 317 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SPATA22Q8NHS9 363 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TEX47Q8TBZ9 253 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ENKURQ8TC29 256 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ADAMTS14Q8WXS8 1223 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 DYRK2Q92630 601 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ACTR3CQ9C0K3 210 aaPredicted RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 C1orf198Q9H425 327 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CSNK1G1Q9HCP0 422 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 FZD3Q9NPG1 666 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TPSG1Q9NRR2 321 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 OCIAD1Q9NX40 245 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SCAF11Q99590 1463 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 TRBV5-7A0A0A0MS05 114 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 BTBD19C9JJ37 291 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 POC1B-GALNT4F8VUJ3 575 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 RGS5O15539 181 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 SRPX2O60687 465 aaPredicted RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 MRPL19P49406 292 aaKnown RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 HLCSP50747 726 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NAAAQ02083 359 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ARL16Q0P5N6 197 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NAB1Q13506 487 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CALCRLQ16602 461 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 WASHC2DQ5SRD0 308 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 IDNKQ5T6J7 187 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 HACD4Q5VWC8 232 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CYS1Q717R9 158 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 COX15Q7KZN9 410 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 NET1Q7Z628 596 aaPredicted RBP3.19□□□□□ -1.9
XRN1-202ENST00000392981 OR51E1Q8TCB6 317 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 TMEM239Q8WW34 195 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 FAM168AQ92567 244 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CPVLQ9H3G5 476 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 PARPBPQ9NWS1 579 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CNTLNQ9NXG0 1405 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 FAM30AQ9NZY2 134 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 PADI3Q9ULW8 664 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 ANKRD26Q9UPS8 1709 aa3.19□□□□□ -1.9
XRN1-202ENST00000392981 CASZ1Q86V15 1759 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CARMIL2Q6F5E8 1435 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SYCE1LA8MT33 242 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CENPBD1B2RD01 187 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 LRRN3E7EW58 273 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SLC1A7O00341 560 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SSNA1O43805 119 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 IFNA14P01570 189 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 FGF2P09038 288 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 COL8A1P27658 744 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 HLA-DMAP28067 261 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 FGF9P31371 208 aaPredicted RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 MAGEA6P43360 314 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 OR2B6P58173 313 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 SLC10A7Q0GE19 358 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 BEND3Q5T5X7 828 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ATP1A1-AS1Q5TC04 95 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 BSPRYQ5W0U4 402 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 DUPD1Q68J44 220 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 BTNL3Q6UXE8 466 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 OR5T2Q8NGG2 359 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 OR5M9Q8NGP3 310 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CIDECQ96AQ7 238 aaPredicted RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 MED8Q96G25 268 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ZBED3Q96IU2 234 aaPredicted RBP3.18□□□□□ -1.9
XRN1-202ENST00000392981 OLFM3Q96PB7 478 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 APOL4Q9BPW4 351 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ZYG11BQ9C0D3 744 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 CXXC4Q9H2H0 198 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 THSD1Q9NS62 852 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ARL2BPQ9Y2Y0 163 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 ARAP3Q8WWN8 1544 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 A0A1B0GUS0 222 aa3.18□□□□□ -1.9
XRN1-202ENST00000392981 A0A1W2PRD5 423 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms