RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PTDSS2Q9BVG9 487 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 TP63Q9H3D4 680 aaPredicted RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 TRAPPC4Q9Y296 219 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 GCN1Q92616 2671 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 ADGRG4Q8IZF6 3080 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 ESPL1Q14674 2120 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 LIPT2A6NK58 231 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 KPNA4O00629 521 aaPredicted RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 FKBP6O75344 327 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 PMS2P2O95744 297 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 TGM6O95932 706 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 RRM2P31350 389 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 RBM34P42696 430 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 UGT2B15P54855 530 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 RAC3P60763 192 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 RPS3AP61247 264 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 SPIBQ01892 262 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 PON3Q15166 354 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 SGCBQ16585 318 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 PDSS1Q5T2R2 415 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 TBPL2Q6SJ96 375 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 SEM1Q6ZVN7 128 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 CHMP1BQ7LBR1 199 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 PFN4Q8NHR9 129 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 FNDC9Q8TBE3 224 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 DUS3LQ96G46 650 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 MEPEQ9NQ76 525 aaPredicted RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 TIGARQ9NQ88 270 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 MPDZO75970 2070 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 KIAA1549Q9HCM3 1950 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 TRAV36DV7A0A075B6V5 113 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 A0A087WUU8 490 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 IGHV3-15A0A0B4J1V0 119 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 TRBV4-1A0A0J9YWV2 114 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 FTCDNL1E5RQL4 147 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 LRRN3E7EW58 273 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 ENTPD5O75356 428 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 GADD45GO95257 159 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 HOXD4P09016 255 aaPredicted RBP11.34□□□□□ -0.59
SMN1-202ENST00000380707 HOXB6P17509 224 aaKnown RBP11.34□□□□□ -0.59
SMN1-202ENST00000380707 KLK2P20151 261 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 FPR1P21462 350 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 ENPP1P22413 925 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 PTGER4P35408 488 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 IDUAP35475 653 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 CASP6P55212 293 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 OR2B6P58173 313 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 CSNK2A1P68400 391 aaPredicted RBP11.34□□□□□ -0.59
SMN1-202ENST00000380707 LTBQ06643 244 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 PPP1R8Q12972 351 aaKnown RBP11.34□□□□□ -0.59
SMN1-202ENST00000380707 SEC23BQ15437 767 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 OR7A5Q15622 319 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 FGD3Q5JSP0 725 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 C1orf185Q5T7R7 199 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 NSUN5P2Q63ZY6 315 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 OR2T5Q6IEZ7 315 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 PODNL1Q6PEZ8 512 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 C5orf46Q6UWT4 87 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 B3GNT6Q6ZMB0 384 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 MARVELD2Q8N4S9 558 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 OR2T29Q8NH02 315 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 PYDC1Q8WXC3 89 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 ACOT11Q8WXI4 607 aaPredicted RBP11.34□□□□□ -0.59
SMN1-202ENST00000380707 SLC25A36Q96CQ1 311 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 HS6ST2Q96MM7 605 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 MOGAT1Q96PD6 335 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 FUZQ9BT04 418 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 SLC19A3Q9BZV2 496 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 ANKRD19PQ9H560 264 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 CALHM2Q9HA72 323 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 C20orf141Q9NUB4 165 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 ARMC1Q9NVT9 282 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 PAQR5Q9NXK6 330 aaPredicted RBP11.34□□□□□ -0.59
SMN1-202ENST00000380707 VNN3Q9NY84 501 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 CLCF1Q9UBD9 225 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 AP4S1Q9Y587 144 aa11.34□□□□□ -0.59
SMN1-202ENST00000380707 HIVEP3Q5T1R4 2406 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 CD8B2A6NJW9 211 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 SLC22A20A6NK97 555 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 ZNF814B7Z6K7 855 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 E9PLN8 166 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 LRRTM2O43300 516 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 PIP5K1CO60331 668 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 TIPRLO75663 272 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 KRT36O76013 467 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 AQP8O94778 261 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 AHSA1O95433 338 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 CST1P01037 141 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 BGLAPP02818 100 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 GLI4P10075 376 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 PLA2G2AP14555 144 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 LIMS1P48059 325 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 HMGA2P52926 109 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 SMIM11AP58511 58 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 SLC35A1P78382 337 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 H3F3AP84243 136 aa11.33□□□□□ -0.6
SMN1-202ENST00000380707 SF3B4Q15427 424 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMN1-202ENST00000380707 ZNF239Q16600 458 aaKnown RBP11.33□□□□□ -0.6
SMN1-202ENST00000380707 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms