RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 NPIPA1Q9UND3 350 aa16.31■□□□□ 0.2
TRAF3IP1-201ENST00000373327 CACNG2Q9Y698 323 aa16.31■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TMEM129A0AVI4 362 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 PPM1BO75688 479 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 UBL4AP11441 157 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GTF2F2P13984 249 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FBLP22087 321 aaKnown RBP16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SLC6A9P48067 706 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 NRG3P56975 720 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FOXL2P58012 376 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SLC25A35Q3KQZ1 300 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SHISA5Q8N114 240 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 MICU1Q9BPX6 476 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SRRQ9GZT4 340 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SLC2A4RGQ9NR83 387 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 PCDHGB2Q9Y5G2 931 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TRAV18A0A075B6X5 111 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 K7EQS6 105 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SYPP08247 313 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 AP3S2P59780 193 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GALK2Q01415 458 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ZMYND11Q15326 602 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FAM69BQ5VUD6 431 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FAM180AQ6UWF9 173 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TMEM52Q8NDY8 209 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 OR5AK2Q8NH90 309 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FCAMRQ8WWV6 532 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TSLPQ969D9 159 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ARHGAP9Q9BRR9 750 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 MCOLN1Q9GZU1 580 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FKBP14Q9NWM8 211 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TESQ9UGI8 421 aaKnown RBP16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TRDV1A0A1B0GX56 115 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 HMX3A6NHT5 357 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 IDSB3KWA1 339 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SLC16A7O60669 478 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SEMA7AO75326 666 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 IFNA6P05013 189 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 VAMP1P23763 118 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TACR3P29371 465 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FAUP35544 74 aaKnown RBP16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 HTR3AP46098 478 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 THOC7Q6I9Y2 204 aaKnown RBP16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 NIPAL3Q6P499 406 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 KIRREL2Q6UWL6 708 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 CASTOR1Q8WTX7 329 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 CDCP1Q9H5V8 836 aa16.3■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GPR179Q6PRD1 2367 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GALR3O60755 368 aaPredicted RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 RORAP35398 523 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 RAB38P57729 211 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ADAM8P78325 824 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ARHGAP11BQ3KRB8 267 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 DMRTC1Q5HYR2 192 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FAM46BQ96A09 425 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 MRPL38Q96DV4 380 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 OR2A5Q96R48 311 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ALG12Q9BV10 488 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 METTL7AQ9H8H3 244 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SCML1Q9UN30 329 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 KDM4EB2RXH2 506 aaPredicted RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 NPIPB8E9PQR5 432 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ARPC1BO15143 372 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SEMG1P04279 462 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 C21orf58P58505 322 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 EIF2B5Q13144 721 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 FCN2Q15485 313 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 LIN54Q6MZP7 749 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SETD6Q8TBK2 473 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GAS2L1Q99501 681 aaPredicted RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TTYH1Q9H313 450 aaPredicted RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 EXO5Q9H790 373 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GPN1Q9HCN4 374 aaPredicted RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 RBFOX1Q9NWB1 397 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 MGAT4CQ9UBM8 478 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 A0A1W2PPL8 197 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 MAGEA8P43361 318 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 KIR2DL3P43628 341 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 PSMA6P60900 246 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ACTA2P62736 377 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ACTG2P63267 376 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 LPAL2Q16609 132 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 RASGRP3Q8IV61 690 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ELSPBP1Q96BH3 223 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GTPBP2Q9BX10 602 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 PLEKHA1Q9HB21 404 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 COMMD9Q9P000 198 aa16.29■□□□□ 0.2
TRAF3IP1-201ENST00000373327 B4DXG7 233 aa16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SFTPDP35247 375 aa16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SIRPAP78324 504 aa16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 CDK5Q00535 292 aa16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 SLITRK4Q8IW52 837 aa16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 C16orf52Q8NHV5 167 aa16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 TSPAN10Q9H1Z9 355 aaPredicted RBP16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 GMEB2Q9UKD1 530 aa16.28■□□□□ 0.2
TRAF3IP1-201ENST00000373327 OR5K3A6NET4 321 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms