RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PRKCDQ05655 676 aa11□□□□□ -0.65
USF1-203ENST00000368021 BROXQ5VW32 411 aa11□□□□□ -0.65
USF1-203ENST00000368021 RASSF6Q6ZTQ3 369 aa11□□□□□ -0.65
USF1-203ENST00000368021 MARCH3Q86UD3 253 aa11□□□□□ -0.65
USF1-203ENST00000368021 CCDC71Q8IV32 467 aaPredicted RBP11□□□□□ -0.65
USF1-203ENST00000368021 DND1Q8IYX4 353 aaKnown RBP11□□□□□ -0.65
USF1-203ENST00000368021 DEPDC4Q8N2C3 294 aa11□□□□□ -0.65
USF1-203ENST00000368021 CADM2Q8N3J6 435 aa11□□□□□ -0.65
USF1-203ENST00000368021 SPACA9Q96E40 222 aaPredicted RBP11□□□□□ -0.65
USF1-203ENST00000368021 FAM46AQ96IP4 442 aaKnown RBP11□□□□□ -0.65
USF1-203ENST00000368021 ZNF160Q9HCG1 818 aa11□□□□□ -0.65
USF1-203ENST00000368021 HHATLQ9HCP6 504 aa11□□□□□ -0.65
USF1-203ENST00000368021 IL17BQ9UHF5 180 aa11□□□□□ -0.65
USF1-203ENST00000368021 ICAM5Q9UMF0 924 aa11□□□□□ -0.65
USF1-203ENST00000368021 YARS2Q9Y2Z4 477 aaKnown RBP11□□□□□ -0.65
USF1-203ENST00000368021 CAB39Q9Y376 341 aaPredicted RBP11□□□□□ -0.65
USF1-203ENST00000368021 MED31Q9Y3C7 131 aa11□□□□□ -0.65
USF1-203ENST00000368021 MRPS18BQ9Y676 258 aaKnown RBP11□□□□□ -0.65
USF1-203ENST00000368021 A0A087WUJ7 227 aa11□□□□□ -0.65
USF1-203ENST00000368021 ARPC4-TTLL3A0A0A6YYG9 625 aa11□□□□□ -0.65
USF1-203ENST00000368021 ADAM10O14672 748 aa11□□□□□ -0.65
USF1-203ENST00000368021 OIP5O43482 229 aa11□□□□□ -0.65
USF1-203ENST00000368021 ITGA10O75578 1167 aa11□□□□□ -0.65
USF1-203ENST00000368021 PNMTP11086 282 aa11□□□□□ -0.65
USF1-203ENST00000368021 F8A1P23610 371 aa11□□□□□ -0.65
USF1-203ENST00000368021 CDC42P60953 191 aa11□□□□□ -0.65
USF1-203ENST00000368021 CXCR4P61073 352 aa11□□□□□ -0.65
USF1-203ENST00000368021 IFITM2Q01629 132 aa11□□□□□ -0.65
USF1-203ENST00000368021 TEKQ02763 1124 aa11□□□□□ -0.65
USF1-203ENST00000368021 CHAF1BQ13112 559 aa11□□□□□ -0.65
USF1-203ENST00000368021 CDK5R2Q13319 367 aa11□□□□□ -0.65
USF1-203ENST00000368021 MAD2L1BPQ15013 274 aaPredicted RBP11□□□□□ -0.65
USF1-203ENST00000368021 ZNF181Q2M3W8 571 aa11□□□□□ -0.65
USF1-203ENST00000368021 CTU2Q2VPK5 515 aaKnown RBP11□□□□□ -0.65
USF1-203ENST00000368021 RBM48Q5RL73 367 aaKnown RBP11□□□□□ -0.65
USF1-203ENST00000368021 C6orf141Q5SZD1 244 aa11□□□□□ -0.65
USF1-203ENST00000368021 MRGPREQ86SM8 312 aa11□□□□□ -0.65
USF1-203ENST00000368021 RAB43Q86YS6 212 aa11□□□□□ -0.65
USF1-203ENST00000368021 ZNF566Q969W8 418 aa11□□□□□ -0.65
USF1-203ENST00000368021 C3orf49Q96BT1 292 aa11□□□□□ -0.65
USF1-203ENST00000368021 IP6K3Q96PC2 410 aa11□□□□□ -0.65
USF1-203ENST00000368021 NODALQ96S42 347 aa11□□□□□ -0.65
USF1-203ENST00000368021 DCUN1D5Q9BTE7 237 aa11□□□□□ -0.65
USF1-203ENST00000368021 SLC19A3Q9BZV2 496 aa11□□□□□ -0.65
USF1-203ENST00000368021 TP63Q9H3D4 680 aaPredicted RBP11□□□□□ -0.65
USF1-203ENST00000368021 LIN7BQ9HAP6 207 aa11□□□□□ -0.65
USF1-203ENST00000368021 SIAEQ9HAT2 523 aa11□□□□□ -0.65
USF1-203ENST00000368021 P4HTMQ9NXG6 502 aa11□□□□□ -0.65
USF1-203ENST00000368021 CNIH4Q9P003 139 aa11□□□□□ -0.65
USF1-203ENST00000368021 FBXL4Q9UKA2 621 aa11□□□□□ -0.65
USF1-203ENST00000368021 H3BN98 237 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 MPZL2O60487 215 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 ATE1O95260 518 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 NTN1O95631 604 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 IGF2P01344 180 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 CELA2AP08217 269 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 PGCP20142 388 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 ELK4P28324 431 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 SLC1A3P43003 542 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 IDH2P48735 452 aaKnown RBP10.99□□□□□ -0.65
USF1-203ENST00000368021 P2RX1P51575 399 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 CCR4P51679 360 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 C17orf67Q0P5P2 114 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 TOP3AQ13472 1001 aaPredicted RBP10.99□□□□□ -0.65
USF1-203ENST00000368021 CBFBQ13951 182 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 MEP1AQ16819 746 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 ZNF791Q3KP31 576 aaPredicted RBP10.99□□□□□ -0.65
USF1-203ENST00000368021 CCDC58Q4VC31 144 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 ZNF544Q6NX49 715 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 TMEM81Q6P7N7 255 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 OPN5Q6U736 354 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 Q6ZPB1 254 aaPredicted RBP10.99□□□□□ -0.65
USF1-203ENST00000368021 TMPRSS11FQ6ZWK6 438 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 ENTHD1Q8IYW4 607 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 CDK20Q8IZL9 346 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 CLDN22Q8N7P3 220 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 OR5W2Q8NH69 310 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 KIAA1143Q96AT1 154 aaPredicted RBP10.99□□□□□ -0.65
USF1-203ENST00000368021 ARSGQ96EG1 525 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 SH3YL1Q96HL8 342 aaPredicted RBP10.99□□□□□ -0.65
USF1-203ENST00000368021 SECISBP2Q96T21 854 aaKnown RBP10.99□□□□□ -0.65
USF1-203ENST00000368021 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 ZNF221Q9UK13 617 aa10.99□□□□□ -0.65
USF1-203ENST00000368021 PIEZO2Q9H5I5 2752 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 TP53I11O14683 189 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 SULT1B1O43704 296 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 PIP5K1CO60331 668 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 SOX14O95416 240 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 CFL1P23528 166 aaKnown RBP10.98□□□□□ -0.65
USF1-203ENST00000368021 CRHBPP24387 322 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 POU1F1P28069 291 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 GAS1P54826 345 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 SUMO3P55854 103 aaPredicted RBP10.98□□□□□ -0.65
USF1-203ENST00000368021 TMPRSS3P57727 454 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 MLF1P58340 268 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 SNTA1Q13424 505 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 IL10RAQ13651 578 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 CDK10Q15131 360 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 LAIR2Q6ISS4 152 aa10.98□□□□□ -0.65
USF1-203ENST00000368021 H3F3CQ6NXT2 135 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms