RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 NRIP3Q9NQ35 241 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 NDUFB11Q9NX14 153 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 HIF3AQ9Y2N7 669 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 IGHV1-45A0A0A0MS14 117 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 CCDC182A6NF36 153 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 WISP1O95388 367 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 ASAH2BP0C7U1 165 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 CD79BP40259 229 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 RPS5P46782 204 aaKnown RBP23.36■■□□□ 1.33
CLK2-201ENST00000355560 CLDN6P56747 220 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 RAB15P59190 212 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 ARMC4Q5T2S8 1044 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 MOSPD2Q8NHP6 518 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 ELP5Q8TE02 316 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 TEAD3Q99594 435 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 KLHL1Q9NR64 748 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 ERVK13-1Q9NX77 482 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 TAS2R10Q9NYW0 307 aa23.36■■□□□ 1.33
CLK2-201ENST00000355560 C2orf72A6NCS6 295 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 GALR2O43603 387 aaPredicted RBP23.35■■□□□ 1.33
CLK2-201ENST00000355560 STK17BO94768 372 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 SLC2A5P22732 501 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 UGT2B10P36537 528 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 LTBQ06643 244 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 ADCK1Q86TW2 530 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 PHC2Q8IXK0 858 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 OR9Q1Q8NGQ5 310 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 SLC22A8Q8TCC7 542 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 TM9SF4Q92544 642 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 GPX7Q96SL4 187 aaPredicted RBP23.35■■□□□ 1.33
CLK2-201ENST00000355560 KATNB1Q9BVA0 655 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 SPIN1Q9Y657 262 aaPredicted RBP23.35■■□□□ 1.33
CLK2-201ENST00000355560 HS3ST3B1Q9Y662 390 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 J3QRE1 110 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 CBFA2T3O75081 653 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 GYPBP06028 91 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 AQP2P41181 271 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 SERPINB10P48595 397 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.35■■□□□ 1.33
CLK2-201ENST00000355560 C17orf67Q0P5P2 114 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 DCTN2Q13561 401 aaKnown RBP23.35■■□□□ 1.33
CLK2-201ENST00000355560 RAB11FIP2Q7L804 512 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 KBTBD8Q8NFY9 601 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 TTC9Q92623 222 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 TAAR8Q969N4 342 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 ZNF649Q9BS31 505 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 EDEM2Q9BV94 578 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 JAM3Q9BX67 310 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 KLHL21Q9UJP4 597 aa23.35■■□□□ 1.33
CLK2-201ENST00000355560 PMS2P1A4D2B8 440 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 GPX5O75715 221 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 SLC25A12O75746 678 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 ZNF806P0C7X5 589 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 COX6A1P12074 109 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 PSMA1P25786 263 aaKnown RBP23.34■■□□□ 1.33
CLK2-201ENST00000355560 POLR2HP52434 150 aaKnown RBP23.34■■□□□ 1.33
CLK2-201ENST00000355560 ERVK-25P63136 954 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 TUBA1BP68363 451 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 INSM1Q01101 510 aaPredicted RBP23.34■■□□□ 1.33
CLK2-201ENST00000355560 LYPD8Q6UX82 237 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 TUBA1AQ71U36 451 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 NUP54Q7Z3B4 507 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 GRINAQ7Z429 371 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 KLRF1Q9NZS2 232 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 PMF1-BGLAPU3KQ54 211 aa23.34■■□□□ 1.33
CLK2-201ENST00000355560 ARPC3O15145 178 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 INHBBP09529 407 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 TSPAN19P0C672 248 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 CPEP16870 476 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 TMED1Q13445 227 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 MOGQ16653 247 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 ZNF791Q3KP31 576 aaPredicted RBP23.33■■□□□ 1.33
CLK2-201ENST00000355560 BICRALQ6AI39 1079 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 KLHL36Q8N4N3 616 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 ZNF485Q8NCK3 441 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 ARHGAP9Q9BRR9 750 aa23.33■■□□□ 1.33
CLK2-201ENST00000355560 SLIRPQ9GZT3 109 aaKnown RBP23.33■■□□□ 1.33
CLK2-201ENST00000355560 EXOSC4Q9NPD3 245 aaKnown RBP23.33■■□□□ 1.33
CLK2-201ENST00000355560 C12orf71A8MTZ7 269 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 FOLR3P41439 243 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 ALG10Q5BKT4 473 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 NANOGNBQ7Z5D8 188 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 ACBD7Q8N6N7 88 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 DNAJA3Q96EY1 480 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 RASL10BQ96S79 203 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 ZNF700Q9H0M5 742 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 SEC14L4Q9UDX3 406 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 PISDQ9UG56 409 aa23.33■■□□□ 1.32
CLK2-201ENST00000355560 TMED7-TICAM2A0A0A6YYA0 188 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 PNMA8CA0A1B0GUJ8 204 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 SUSD5O60279 629 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 CELA2AP08217 269 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 MRPL3P09001 348 aaKnown RBP23.32■■□□□ 1.32
CLK2-201ENST00000355560 ISXQ2M1V0 245 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 OR10G3Q8NGC4 313 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 RNF138Q8WVD3 245 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 RASD2Q96D21 266 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 FKRPQ9H9S5 495 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 ZNF229Q9UJW7 825 aa23.32■■□□□ 1.32
CLK2-201ENST00000355560 TMED7Q9Y3B3 224 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms