RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 FOXK2Q01167 660 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 OC90Q02509 493 aaPredicted RBP18.61■□□□□ 0.57
TRIM4-202ENST00000354241 PMS2P3Q13401 168 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 PLPPR5Q32ZL2 321 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 C1QL3Q5VWW1 255 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 PRSS48Q7RTY5 328 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 PLCZ1Q86YW0 608 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 SLC43A2Q8N370 569 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 LIPHQ8WWY8 451 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 JSRP1Q96MG2 331 aaPredicted RBP18.61■□□□□ 0.57
TRIM4-202ENST00000354241 OR11A1Q9GZK7 315 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 FAM192AQ9GZU8 254 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 PROK2Q9HC23 129 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 TEKT2Q9UIF3 430 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 BAIAP2Q9UQB8 552 aa18.61■□□□□ 0.57
TRIM4-202ENST00000354241 EFCAB10A6NFE3 127 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 MCIDASD6RGH6 385 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 GFRA3O60609 400 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 MRPS14O60783 128 aaKnown RBP18.6■□□□□ 0.57
TRIM4-202ENST00000354241 FADS2O95864 444 aaKnown RBP18.6■□□□□ 0.57
TRIM4-202ENST00000354241 P04436 131 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 CDK1P06493 297 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 STSP08842 583 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 MAP2K4P45985 399 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 ABHD17BQ5VST6 288 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 C1orf140Q5VVS0 124 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 XAF1Q6GPH4 301 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 CCDC81Q6ZN84 652 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 GPR141Q7Z602 305 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 ANKK1Q8NFD2 765 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 STK35Q8TDR2 534 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 OTULINQ96BN8 352 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 SLC25A36Q96CQ1 311 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 C1GALT1C1Q96EU7 318 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 LHPPQ9H008 270 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 CHRNA9Q9UGM1 479 aa18.6■□□□□ 0.57
TRIM4-202ENST00000354241 RPL36Q9Y3U8 105 aaKnown RBP18.6■□□□□ 0.57
TRIM4-202ENST00000354241 F10P00742 488 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 BGLAPP02818 100 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 HIST1H2ABP04908 130 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ASAH2BP0C7U1 165 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 DBTP11182 482 aaKnown RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 NOS3P29474 1203 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 CYB561P49447 251 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 PRPS1P60891 318 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 RPS4XP62701 263 aaKnown RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 MVKQ03426 396 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 EMX1Q04741 257 aaPredicted RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ZNF91Q05481 1191 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ST3GAL4Q11206 333 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 SRSF6Q13247 344 aaKnown RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 CAMK2BQ13554 666 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 HIST3H2AQ7L7L0 130 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 NANOGNBQ7Z5D8 188 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 SVOPQ8N4V2 548 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ATP6V1C2Q8NEY4 427 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 MOSPD2Q8NHP6 518 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 HIST1H2ACQ93077 130 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 MRGPRX4Q96LA9 322 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ERMAPQ96PL5 475 aaPredicted RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 FKRPQ9H9S5 495 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 CNOT2Q9NZN8 540 aaKnown RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ZNF229Q9UJW7 825 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 SMIM31A0A1B0GVY4 71 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 KDM4EB2RXH2 506 aaPredicted RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 SNPHO15079 494 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 PCMT1P22061 227 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 C21orf33P30042 268 aaPredicted RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 AQP2P41181 271 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 DLX5P56178 289 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 SLC25A53Q5H9E4 307 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 CXXC5Q7LFL8 322 aaKnown RBP18.59■□□□□ 0.57
TRIM4-202ENST00000354241 GPALPP1Q8IXQ4 340 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 OR1J4Q8NGS1 313 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 SIGLEC11Q96RL6 698 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 PTDSS2Q9BVG9 487 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 CMC2Q9NRP2 79 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 SACM1LQ9NTJ5 587 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 NDUFA13Q9P0J0 144 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ABI3Q9P2A4 366 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 HIF3AQ9Y2N7 669 aa18.59■□□□□ 0.57
TRIM4-202ENST00000354241 ANKRD33BA6NCL7 494 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 ARGFXA6NJG6 315 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 FAM183AA6NL82 134 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 ETV2O00321 342 aaPredicted RBP18.58■□□□□ 0.56
TRIM4-202ENST00000354241 DLL1O00548 723 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 PRODHO43272 600 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 NPIPB7O75200 414 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 AHSA1O95433 338 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 JUNBP17275 347 aaPredicted RBP18.58■□□□□ 0.56
TRIM4-202ENST00000354241 SLC15A1P46059 708 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 RAB39AQ14964 217 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 RTP5Q14D33 572 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 RSPO4Q2I0M5 234 aaPredicted RBP18.58■□□□□ 0.56
TRIM4-202ENST00000354241 FAM69AQ5T7M9 428 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 ARHGAP11AQ6P4F7 1023 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 DPY19L2P2Q6ZN68 376 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 CPOQ8IVL8 374 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 OR5M1Q8NGP8 315 aa18.58■□□□□ 0.56
TRIM4-202ENST00000354241 POC1BQ8TC44 478 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms