RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MAP3K8P41279 467 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 IRF8Q02556 426 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PIN1Q13526 163 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-203ENST00000349748 TAF13Q15543 124 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ARMC12Q5T9G4 340 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 TMEM244Q5VVB8 128 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 TCTN3Q6NUS6 607 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 FOXRED2Q8IWF2 684 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 BEST3Q8N1M1 668 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 OR8J2Q8NGG1 315 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 TMED6Q8WW62 240 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ROBO4Q8WZ75 1007 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 GAL3ST3Q96A11 431 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PHYHIPLQ96FC7 376 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 FUBP3Q96I24 572 aaKnown RBP eCLIP9.84□□□□□ -0.83
CAPN3-203ENST00000349748 AKR1E2Q96JD6 320 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PRM3Q9NNZ6 103 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PRDM5Q9NQX1 630 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-203ENST00000349748 RALGAPA2Q2PPJ7 1873 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-203ENST00000349748 H1F0P07305 194 aaKnown RBP9.84□□□□□ -0.83
CAPN3-203ENST00000349748 OR8G3PP0DMU2 310 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 GABREP78334 506 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 INSM1Q01101 510 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-203ENST00000349748 HYAL4Q2M3T9 481 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 SLC25A30Q5SVS4 291 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ARHGAP40Q5TG30 622 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 TTLL10Q6ZVT0 673 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 BBS10Q8TAM1 723 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CMTM7Q96FZ5 175 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 SMARCD1Q96GM5 515 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 GAL3ST4Q96RP7 486 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 FN3KRPQ9HA64 309 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 TMEM27Q9HBJ8 222 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 NAP1L6A6NFF2 107 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PHOX2AO14813 284 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 SBK2P0C263 348 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CD79AP11912 226 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ACVR1BP36896 505 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CD200P41217 278 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 LBX1P52954 281 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 NRG3P56975 720 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PJVKQ0ZLH3 352 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 NKAPLQ5M9Q1 402 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CPTPQ5TA50 214 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ANXA8L1Q5VT79 327 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 RPTNQ6XPR3 784 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CDK20Q8IZL9 346 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 PPCDCQ96CD2 204 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 DERL3Q96Q80 235 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ZDHHC5Q9C0B5 715 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 FBXO44Q9H4M3 255 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 MMP26Q9NRE1 261 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 ZMIZ1Q9ULJ6 1067 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 TNFSF18Q9UNG2 199 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 NOD1Q9Y239 953 aa9.84□□□□□ -0.83
CAPN3-203ENST00000349748 CCDC88CQ9P219 2028 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 SMIM28A0A1B0GU29 152 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 OR5H14A6NHG9 310 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 FAM183AA6NL82 134 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 PSMD9O00233 223 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 FAAHO00519 579 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 F10P00742 488 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 C5AR1P21730 350 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 MAT2AP31153 395 aaKnown RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 MC4RP32245 332 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 CD80P33681 288 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 GSK3AP49840 483 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 HBA1P69905 142 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TRA2AQ13595 282 aaKnown RBP eCLIP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 MST1LQ2TV78 715 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 AWAT1Q58HT5 328 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 LY6G6FQ5SQ64 297 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 PODNL1Q6PEZ8 512 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 DHRS11Q6UWP2 260 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 SIRT6Q8N6T7 355 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 C17orf47Q8NEP4 570 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 SDR9C7Q8NEX9 313 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 OR4D11Q8NGI4 311 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 OR51G2Q8NGK0 314 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 SEC22AQ96IW7 307 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 ACBD6Q9BR61 282 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 SLC35A5Q9BS91 424 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TMEM248Q9NWD8 314 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TAS2R10Q9NYW0 307 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 DOK5Q9P104 306 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 KLHL9Q9P2J3 617 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 CHRNA9Q9UGM1 479 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 AK6Q9Y3D8 172 aaKnown RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 ZNF236Q9UL36 1845 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 ZC3H12DA2A288 527 aaKnown RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 GGT3PA6NGU5 568 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 IDSB3KWA1 339 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 RNASEK-C17orf49H0YIS7 233 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 BLOC1S5-TXNDC5H3BN57 136 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 DUSP11O75319 330 aaKnown RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 ITGA10O75578 1167 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 SFTPBP07988 381 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 GRK4P32298 578 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms