RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 KLK1P06870 262 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 NFYBP25208 207 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 PPP2CBP62714 309 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 PPP2CAP67775 309 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 PJVKQ0ZLH3 352 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 TEAD2Q15562 447 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 C4orf46Q504U0 113 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 SDHAF4Q5VUM1 108 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 RNF219Q5W0B1 726 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-201ENST00000342245 CD300LGQ6UXG3 332 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 COMTD1Q86VU5 262 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 TFGQ92734 400 aaPredicted RBP17.11■□□□□ 0.33
SMPD1-201ENST00000342245 HIST1H2BAQ96A08 127 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 TUBA4BQ9H853 241 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 ST6GALNAC2Q9UJ37 374 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 PCDHB8Q9UN66 801 aa17.11■□□□□ 0.33
SMPD1-201ENST00000342245 RNF222A6NCQ9 220 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 OR2AT4A6NND4 320 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 KLHL18O94889 574 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 CD160O95971 181 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 MELTFP08582 738 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 TMEM115Q12893 351 aaPredicted RBP17.1■□□□□ 0.33
SMPD1-201ENST00000342245 SYPL1Q16563 259 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 FAAP20Q6NZ36 180 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 ENPP7Q6UWV6 458 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 SUN3Q8TAQ9 357 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 GCDHQ92947 438 aaPredicted RBP17.1■□□□□ 0.33
SMPD1-201ENST00000342245 SMIM19Q96E16 107 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 DZANK1Q9NVP4 752 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 SPG21Q9NZD8 308 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 OR6C76A6NM76 312 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 F5H0A9 414 aaPredicted RBP17.1■□□□□ 0.33
SMPD1-201ENST00000342245 H7BY64 318 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 PPM1DO15297 605 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 KLF4O43474 513 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 SLC2A10O95528 541 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 OR8U8P0C7N1 319 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 DLSTP36957 453 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 MEX3DQ86XN8 651 aaKnown RBP17.1■□□□□ 0.33
SMPD1-201ENST00000342245 KDF1Q8NAX2 398 aaPredicted RBP17.1■□□□□ 0.33
SMPD1-201ENST00000342245 OR5J2Q8NH18 312 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 C14orf79Q96F83 325 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 C14orf144Q96I85 54 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 NRIP2Q9BQI9 281 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 OCSTAMPQ9BR26 566 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 TOLLIPQ9H0E2 274 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 SEC61A2Q9H9S3 476 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 FBXL4Q9UKA2 621 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 SLC13A4Q9UKG4 626 aa17.1■□□□□ 0.33
SMPD1-201ENST00000342245 TTC3P53804 2025 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 F2P00734 622 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 TPT1P13693 172 aaKnown RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 SDHAP31040 664 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 BUD31P41223 144 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 MAPK8P45983 427 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 RPS24P62847 133 aaKnown RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 NKPD1Q17RQ9 610 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 FCRLAQ7L513 359 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 TMPRSS11BQ86T26 416 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 SYNPRQ8TBG9 265 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 WNT2BQ93097 391 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 MYOZ1Q9NP98 299 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 AHSPQ9NZD4 102 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 KIF26AQ9ULI4 1882 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 H7C417 338 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 OR2T1O43869 369 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 FADS1O60427 444 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 F12P00748 615 aaPredicted RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 CATP04040 527 aaKnown RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 APEHP13798 732 aaKnown RBP17.09■□□□□ 0.33
SMPD1-201ENST00000342245 TAS2R20P59543 309 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 ST8SIA6P61647 398 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 NAAAQ02083 359 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 POU4F2Q12837 409 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 TMEM244Q5VVB8 128 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 PRAMEF8Q5VWM4 474 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 PRAMEF7Q5VXH5 474 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 UNQ9370/PRO34162Q6UXP9 181 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 OR5M8Q8NGP6 311 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 MIB2Q96AX9 1013 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 SLC35G5Q96KT7 338 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 HSPA12BQ96MM6 686 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 TAAR9Q96RI9 348 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 C1QTNF2Q9BXJ5 285 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 UBQLN3Q9H347 655 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 TMEM27Q9HBJ8 222 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 ACKR4Q9NPB9 350 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 MTFP1Q9UDX5 166 aa17.09■□□□□ 0.33
SMPD1-201ENST00000342245 CDHR4A6H8M9 788 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 ANTXRLA6NF34 631 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 PPIHO43447 177 aaKnown RBP17.08■□□□□ 0.33
SMPD1-201ENST00000342245 SOCS5O75159 536 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.33
SMPD1-201ENST00000342245 EPPINO95925 133 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 IFNA10P01566 189 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 ATP1B2P14415 290 aaPredicted RBP17.08■□□□□ 0.33
SMPD1-201ENST00000342245 HPGDP15428 266 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 PYCR1P32322 319 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms