RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 C22orf42Q6IC83 251 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 MEPCEQ7L2J0 689 aaKnown RBP6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 KLBQ86Z14 1044 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ZBTB44Q8NCP5 570 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 OR10H4Q8NGA5 316 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 OR6Q1Q8NGQ2 317 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 MCFD2Q8NI22 146 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 RHBDD1Q8TEB9 315 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 Q96M85 177 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ARHGAP9Q9BRR9 750 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 KATNB1Q9BVA0 655 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 HDHD5Q9BXW7 423 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 PLGRKTQ9HBL7 147 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 AKIP1Q9NQ31 210 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ASB6Q9NWX5 421 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 CFL2Q9Y281 166 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 NPFFR2Q9Y5X5 522 aa6.74□□□□□ -1.33
SRFBP1-201ENST00000339397 ALG1L2C9J202 215 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 PSMD9O00233 223 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 DCTN6O00399 190 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 FADS1O60427 444 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 OR2J2O76002 312 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 CER1O95813 267 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 GPANK1O95872 356 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 OPN1LWP04000 364 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC2A5P22732 501 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 CDKN2AP42771 156 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SH3BGRP55822 239 aaPredicted RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 FABP5Q01469 135 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ZFP36L1Q07352 338 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 MLLT11Q13015 90 aaPredicted RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SF3A2Q15428 464 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 YOD1Q5VVQ6 348 aaPredicted RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ARSKQ6UWY0 536 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 KDM8Q8N371 416 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 MFSD4AQ8N468 514 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 PSD4Q8NDX1 1056 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 RFKQ969G6 155 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 C1GALT1C1Q96EU7 318 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 LPAR4Q99677 370 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 TMED9Q9BVK6 235 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ADAM19Q9H013 955 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SNTG1Q9NSN8 517 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 NDUFB11Q9NX14 153 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 TMEM5Q9Y2B1 443 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 EXOGQ9Y2C4 368 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SF3B6Q9Y3B4 125 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 B3GALT1Q9Y5Z6 326 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 RTTNQ86VV8 2226 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 NUP210LQ5VU65 1888 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ZFHX2Q9C0A1 2572 aaPredicted RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SHISA3A0PJX4 238 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 FAM86C2PA6NEL3 165 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SAGE2PA6NJ88 616 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 TO15178 435 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 NDUFB2O95178 105 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 CPEP16870 476 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 PSMA1P25786 263 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 GRPRP30550 384 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 NAA10P41227 235 aaPredicted RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 RPS27P42677 84 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 OR12D2P58182 307 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 INAQ16352 499 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF74Q16587 644 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 MRPL14Q6P1L8 145 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 C16orf87Q6PH81 154 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 PLEKHG7Q6ZR37 379 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 USP43Q70EL4 1123 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 CPEB2Q7Z5Q1 589 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 FAM98AQ8NCA5 519 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 NPEPL1Q8NDH3 523 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 PRR7Q8TB68 274 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 METTL21AQ8WXB1 218 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC25A36Q96CQ1 311 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 VMP1Q96GC9 406 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ASPNQ9BXN1 380 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 TEX12Q9BXU0 123 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ULBP3Q9BZM4 244 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 SEMA4CQ9C0C4 833 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 HOXD1Q9GZZ0 328 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 ADGRL4Q9HBW9 690 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 MMP25Q9NPA2 562 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 NANSQ9NR45 359 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 MED17Q9NVC6 651 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 TXNL4BQ9NX01 149 aaKnown RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 MED11Q9P086 117 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 CAB39Q9Y376 341 aaPredicted RBP6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 GRIP1Q9Y3R0 1128 aa6.73□□□□□ -1.33
SRFBP1-201ENST00000339397 RALGAPA1Q6GYQ0 2036 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 A0A087WV48 116 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 A0A1W2PQL4 384 aaPredicted RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 TMEM129A0AVI4 362 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 METTL15A6NJ78 407 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 RIIAD1A6NNX1 92 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 C11orf98E9PRG8 122 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 KLF7O75840 302 aaPredicted RBP6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 OR7A10O76100 309 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 IGHA1P01876 353 aa6.72□□□□□ -1.33
SRFBP1-201ENST00000339397 TFP02787 698 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms