RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 A0A087WV48 116 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 A0A0A6YYC8 382 aaPredicted RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 I3L1I5 382 aaPredicted RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 ANXA3P12429 323 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 GIFP27352 417 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 RPL4P36578 427 aaKnown RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 GDI2P50395 445 aaKnown RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 MAT1AQ00266 395 aaKnown RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 ESCO2Q56NI9 601 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 SIGIRRQ6IA17 410 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 BEST4Q8NFU0 473 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 SLC37A2Q8TED4 501 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 RSC1A1Q92681 617 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 GCDHQ92947 438 aaPredicted RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 MRPL15Q9P015 296 aaKnown RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 COPZ2Q9P299 210 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 LRIT1Q9P2V4 623 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 ELF5Q9UKW6 265 aaPredicted RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 ARID1BQ8NFD5 2236 aaPredicted RBP13.89□□□□□ -0.19
CSDC2-201ENST00000306149 SELENOFO60613 162 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 ST6GAL1P15907 406 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 S1PR1P21453 382 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 CTHP32929 405 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 TPMTP51580 245 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 PER3P56645 1201 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 SIAH3Q8IW03 269 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 CCDC28AQ8IWP9 274 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 RCBTB1Q8NDN9 531 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 SLC2A12Q8TD20 617 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 SNX33Q8WV41 574 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 YIPF5Q969M3 257 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 ZNF222Q9UK12 451 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 COPS3Q9UNS2 423 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 SDK1Q7Z5N4 2213 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 COL4A2P08572 1712 aa13.89□□□□□ -0.19
CSDC2-201ENST00000306149 A0A1W2PQ72 361 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 UBL3O95164 117 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 TCRBP04435 133 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ADRB1P08588 477 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 MMP15P51511 669 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 PGDP52209 483 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ACTC1P68032 377 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ACTA1P68133 377 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 IKZF1Q13422 519 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ZCCHC12Q6PEW1 402 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ELMOD2Q8IZ81 293 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 SLC22A18ASQ8N1D0 253 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 TOMM5Q8N4H5 51 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 GATSQ8NAP1 163 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 OR6K6Q8NGW6 343 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 HAVCR2Q8TDQ0 301 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ZNF431Q8TF32 576 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 MS4A3Q96HJ5 214 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 OR51J1Q9H342 316 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 HAO2Q9NYQ3 351 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 CHRNA9Q9UGM1 479 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 TRBV2A0A0J9YWF9 115 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 LEUTXA8MZ59 168 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 IFNGP01579 166 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 MT-ND4P03905 459 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 HOXC4P09017 264 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ANKRD34CP0C6C1 535 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 EPXP11678 715 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 BTG2P78543 158 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 DLX2Q07687 328 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ZNF267Q14586 743 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ARHGAP11AQ6P4F7 1023 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 MS4A15Q8N5U1 240 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 METTL27Q8N6F8 245 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ZNF655Q8N720 491 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 OR8H1Q8NGG4 311 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 OR4C3Q8NH37 302 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 RASD2Q96D21 266 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 DERL3Q96Q80 235 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ZNF426Q9BUY5 554 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 PRDM9Q9NQV7 894 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 C14orf105Q9NVL8 296 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 DZANK1Q9NVP4 752 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 MGAT4AQ9UM21 535 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 TRAV1-2A0A0B4J238 106 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 TEX13CA0A0J9YWL9 993 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 A0A0J9YY10 115 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 A0A1B0GVT2 93 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 ICMTO60725 284 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 AK1P00568 194 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 SLC35E2P0CK97 266 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 CXCL3P19876 107 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 EDNRAP25101 427 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 RAG2P55895 527 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 RPS11P62280 158 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 SIRPAP78324 504 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 PITPNAQ00169 270 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 CDK5R1Q15078 307 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 NPSR1Q6W5P4 371 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 AVL9Q8NBF6 648 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 RIT1Q92963 219 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 HGDQ93099 445 aa13.88□□□□□ -0.19
CSDC2-201ENST00000306149 DACT3Q96B18 629 aaPredicted RBP13.88□□□□□ -0.19
CSDC2-201ENST00000306149 RBM18Q96H35 190 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms