RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PRKACGP22612 351 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 CHMP24386 653 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 RGS19P49795 217 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 DAPP51397 102 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 EEF1A1P5Q5VTE0 462 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 KCTD9Q7L273 389 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SLC46A3Q7Z3Q1 461 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 GAB3Q8WWW8 586 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SENP5Q96HI0 755 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 C10orf90Q96M02 699 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 FGF20Q9NP95 211 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 HIF1ANQ9NWT6 349 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ATAD3CQ5T2N8 411 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 C12orf73Q69YU5 71 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ZNF793Q6ZN11 406 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 UBE3DQ7Z6J8 389 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 HS3ST5Q8IZT8 346 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ZNF355PQ9NSJ1 428 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 A0A1B0GVC2 190 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SLC35F4A4IF30 521 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 CD1CP29017 333 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 MLLT10P55197 1068 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 MAZP56270 477 aaKnown RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 EXT1Q16394 746 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 RHBDD2Q6NTF9 364 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ZNF454Q8N9F8 522 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 NUBPLQ8TB37 319 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SLC6A18Q96N87 628 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 NEDD4LQ96PU5 975 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 KCMF1Q9P0J7 381 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 PCDH10Q9P2E7 1040 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 MAGED1Q9Y5V3 778 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 LINC01387J3KSC0 135 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SFTPBP07988 381 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 PAX7P23759 505 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 THBS2P35442 1172 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SLC15A1P46059 708 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SEC23BQ15437 767 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 PODNL1Q6PEZ8 512 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SHFQ7M4L6 423 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 MENTQ9BUN1 341 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 LAT2Q9GZY6 243 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 NGBQ9NPG2 151 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 COMMD3Q9UBI1 195 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 KANTRA0A1W2PQU2 76 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 FRG2CA6NGY1 282 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ZNF182P17025 639 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 MELKQ14680 651 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 NRMQ8IXM6 262 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 LSMEM1Q8N8F7 131 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SLC16A11Q8NCK7 471 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 HTRA1Q92743 480 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 LRR1Q96L50 414 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 SFXN2Q96NB2 322 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 MRPS18AQ9NVS2 196 aaKnown RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 TAS2R10Q9NYW0 307 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 KCNG2Q9UJ96 466 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 EXO1Q9UQ84 846 aaKnown RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 TMEM184BQ9Y519 407 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 PTPRDP23468 1912 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 PLSCR5A0PG75 271 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ANKRD61A6NGH8 418 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ZNF264O43296 627 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 DNAJB6O75190 326 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ENTPD6O75354 484 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 POU3F2P20265 443 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 NR4A1P22736 598 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 AZGP1P25311 298 aaKnown RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 RORCP51449 518 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 AKR1D1P51857 326 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 NKG7Q16617 165 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 IER5LQ5T953 404 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ABHD12BQ7Z5M8 362 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 NDNFQ8TB73 568 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 BPIFA2Q96DR5 249 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 CDC6Q99741 560 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 CRB3Q9BUF7 120 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 CPNE5Q9HCH3 593 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 PRMT8Q9NR22 394 aaPredicted RBP7.61□□□□□ -1.19
PTPN3-201ENST00000262539 ZNF337Q9Y3M9 751 aa7.61□□□□□ -1.19
PTPN3-201ENST00000262539 FGF17O60258 216 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 FMO3P31513 532 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 POU3F4P49335 361 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 CCL11P51671 97 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 PIN1Q13526 163 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-201ENST00000262539 ZNF620Q6ZNG0 422 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 TRIM73Q86UV7 250 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 OR10A5Q9H207 317 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 OR52D1Q9H346 318 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 C17orf105B2RV13 164 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 DISC1C4P0D8 188 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 BCAS1O75363 584 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-201ENST00000262539 MRPL3P09001 348 aaKnown RBP7.6□□□□□ -1.19
PTPN3-201ENST00000262539 CD3GP09693 182 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 TUBG1P23258 451 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 DEFB110Q30KQ9 67 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 MAL2Q969L2 176 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 CIDECQ96AQ7 238 aaPredicted RBP7.6□□□□□ -1.19
PTPN3-201ENST00000262539 SGCZQ96LD1 299 aa7.6□□□□□ -1.19
PTPN3-201ENST00000262539 HDHD5Q9BXW7 423 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms