RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 KLHDC3Q9BQ90 382 aa25.2■■□□□ 1.62
CCM2-201ENST00000258781 ULBP3Q9BZM4 244 aa25.2■■□□□ 1.62
CCM2-201ENST00000258781 TEX51A0A1B0GUA7 166 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 CCDC182A6NF36 153 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 LRRN3E7EW58 273 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 SLC2A5P22732 501 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 ITPKBP27987 946 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 P2RX1P51575 399 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 BMXP51813 675 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 OR2G6Q5TZ20 316 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 CROCCP3Q8IVE0 287 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 AMER2Q8N7J2 671 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 ZNF485Q8NCK3 441 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 OR52N1Q8NH53 320 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 BORCS5Q969J3 196 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 MCIDASD6RGH6 385 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 SCO2O43819 266 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 DKK1O94907 266 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 PSMA1P25786 263 aaKnown RBP25.19■■□□□ 1.62
CCM2-201ENST00000258781 EGR4Q05215 589 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 ANKDD1AQ495B1 522 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 FCRLBQ6BAA4 426 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 SIRT6Q8N6T7 355 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 DEPDC7Q96QD5 511 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 ARHGAP9Q9BRR9 750 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 ZNF649Q9BS31 505 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 MMP25Q9NPA2 562 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 ERVK13-1Q9NX77 482 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 CCDC59Q9P031 241 aaKnown RBP25.19■■□□□ 1.62
CCM2-201ENST00000258781 PISDQ9UG56 409 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 STUB1Q9UNE7 303 aa25.19■■□□□ 1.62
CCM2-201ENST00000258781 TMEM200CA6NKL6 621 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 ARPC3O15145 178 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 IDH3BO43837 385 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 GPX5O75715 221 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 ZFAND5O76080 213 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 FTH1P19P0C7X4 201 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 GP1BBP13224 206 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 TPBGQ13641 420 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 FAM199XQ6PEV8 388 aaPredicted RBP25.18■■□□□ 1.62
CCM2-201ENST00000258781 FAM198BQ6UWH4 519 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 KLHL36Q8N4N3 616 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 OR51G2Q8NGK0 314 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 SECISBP2Q96T21 854 aaKnown RBP25.18■■□□□ 1.62
CCM2-201ENST00000258781 HIF3AQ9Y2N7 669 aa25.18■■□□□ 1.62
CCM2-201ENST00000258781 SPIN1Q9Y657 262 aaPredicted RBP25.18■■□□□ 1.62
CCM2-201ENST00000258781 ADAM10O14672 748 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 RPL4P36578 427 aaKnown RBP25.17■■□□□ 1.62
CCM2-201ENST00000258781 KLHL12Q53G59 568 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 SOWAHCQ53LP3 525 aaPredicted RBP25.17■■□□□ 1.62
CCM2-201ENST00000258781 C16orf47Q6ZP98 133 aaPredicted RBP25.17■■□□□ 1.62
CCM2-201ENST00000258781 LHFPL3Q86UP9 236 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 B4GALNT2Q8NHY0 566 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 C8orf44Q96CB5 159 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 TEAD3Q99594 435 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 NRIP3Q9NQ35 241 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 NANSQ9NR45 359 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 HAO2Q9NYQ3 351 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 PCDHGB6Q9Y5F9 930 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 IER3IP1Q9Y5U9 82 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 A3GALT2U3KPV4 340 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 LOC102723996A0A087X1L8 192 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 C9J4A7 227 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 TSPAN19P0C672 248 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 CXCR1P25024 350 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 RPS3AP61247 264 aaKnown RBP25.17■■□□□ 1.62
CCM2-201ENST00000258781 DCAF12Q5T6F0 453 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 LIPKQ5VXJ0 399 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 ACBD7Q8N6N7 88 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 GATAD2BQ8WXI9 593 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 TM9SF4Q92544 642 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 HGDQ93099 445 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 MR1Q95460 341 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 TMCO6Q96DC7 493 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 INPP5EQ9NRR6 644 aa25.17■■□□□ 1.62
CCM2-201ENST00000258781 PTPRZ1P23471 2315 aaPredicted RBP25.16■■□□□ 1.62
CCM2-201ENST00000258781 NUDT14O95848 222 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 JMJD7P0C870 316 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 OPRL1P41146 370 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 CRYBB2P43320 205 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 RAB15P59190 212 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 ACSM1Q08AH1 577 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 TOMM34Q15785 309 aaPredicted RBP25.16■■□□□ 1.62
CCM2-201ENST00000258781 C10orf53Q8N6V4 93 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 THAP3Q8WTV1 239 aaPredicted RBP25.16■■□□□ 1.62
CCM2-201ENST00000258781 RNF167Q9H6Y7 350 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 SLC6A5Q9Y345 797 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 SDK2Q58EX2 2172 aa25.16■■□□□ 1.62
CCM2-201ENST00000258781 WWP2O00308 870 aa25.15■■□□□ 1.62
CCM2-201ENST00000258781 ZNF354AO60765 605 aaPredicted RBP25.15■■□□□ 1.62
CCM2-201ENST00000258781 ASAH2BP0C7U1 165 aa25.15■■□□□ 1.62
CCM2-201ENST00000258781 HIST1H1CP16403 213 aaKnown RBP25.15■■□□□ 1.62
CCM2-201ENST00000258781 FBXW4P57775 412 aa25.15■■□□□ 1.62
CCM2-201ENST00000258781 RPS7P62081 194 aaKnown RBP25.15■■□□□ 1.62
CCM2-201ENST00000258781 ZNF517Q6ZMY9 492 aaPredicted RBP25.15■■□□□ 1.62
CCM2-201ENST00000258781 IGFN1Q86VF2 1251 aa25.15■■□□□ 1.62
CCM2-201ENST00000258781 CYB561A3Q8NBI2 242 aa25.15■■□□□ 1.62
CCM2-201ENST00000258781 FAM98AQ8NCA5 519 aaKnown RBP25.15■■□□□ 1.62
CCM2-201ENST00000258781 OR52E2Q8NGJ4 325 aa25.15■■□□□ 1.62
CCM2-201ENST00000258781 OR6Q1Q8NGQ2 317 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms