RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 MS4A8Q9BY19 250 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF281Q9Y2X9 895 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 YARS2Q9Y2Z4 477 aaKnown RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MRPS2Q9Y399 296 aaKnown RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 PAPPAQ13219 1627 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 GASTP01350 101 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 TCN2P20062 427 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CHATP28329 748 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 RACK1P63244 317 aaKnown RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 SLC5A12Q1EHB4 618 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 SLX4IPQ5VYV7 408 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CGB2Q6NT52 195 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 SERPINA12Q8IW75 414 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 OR8J2Q8NGG1 315 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 EPHX3Q9H6B9 360 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MED20Q9H944 212 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 PLEKHM1Q9Y4G2 1056 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 ADAM23O75077 832 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 DRD5P21918 477 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CX3CR1P49238 355 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 SHHQ15465 462 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 GPR19Q15760 415 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 LINC00696Q6ZRV3 163 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 AAED1Q7RTV5 226 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 TMEM178AQ8NBL3 297 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 DUSP19Q8WTR2 217 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 PSMF1Q92530 271 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MIB2Q96AX9 1013 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MMP28Q9H239 520 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 HHLA2Q9UM44 414 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 PAPPA2Q9BXP8 1791 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CDHR4A6H8M9 788 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 NKX6-3A6NJ46 265 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CBX7O95931 251 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CAV2P51636 162 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 GPR176Q14439 515 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 SLC22A6Q4U2R8 563 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 GARNL3Q5VVW2 1013 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 HACD4Q5VWC8 232 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MED25Q71SY5 747 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 GGHQ92820 318 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 SLC46A1Q96NT5 459 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 C1GALT1Q9NS00 363 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 H7C1C5 153 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 GABRPO00591 440 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 PIP5K1CO60331 668 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 F10P00742 488 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF44P15621 663 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 CA5AP35218 305 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 HOXA1P49639 335 aaPredicted RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 TPMTP51580 245 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 LCN6P62502 163 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MRPS10P82664 201 aaKnown RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 C17orf67Q0P5P2 114 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 C6orf183Q5T699 404 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 NPSR1Q6W5P4 371 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 TPRA1Q86W33 373 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 PDZD9Q8IXQ8 264 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MKXQ8IYA7 352 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 WDSUB1Q8N9V3 476 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 AP1S3Q96PC3 154 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 ZIC5Q96T25 663 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 PAQR5Q9NXK6 330 aaPredicted RBP8.1□□□□□ -1.11
PTCD3-201ENST00000254630 MOKQ9UQ07 419 aa8.1□□□□□ -1.11
PTCD3-201ENST00000254630 LRP5O75197 1615 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 OR5K3A6NET4 321 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 DVL2O14641 736 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF780AO75290 641 aaPredicted RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 TUSC2O75896 110 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SLC22A5O76082 557 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 PAHP00439 452 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ADPRHP54922 357 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 LIM2P55344 173 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 TAS2R46P59540 309 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 MARCH3Q86UD3 253 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SULF2Q8IWU5 870 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ESX1Q8N693 406 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 OR4F15Q8NGB8 312 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 FNDC9Q8TBE3 224 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF286AQ9HBT8 521 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 A0A1B0GX78 115 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 PRAMEF25A6NGN4 478 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 G3V3Y1 287 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ARPC1BO15143 372 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 HCRTR1O43613 425 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 CD53P19397 219 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 CAV3P56539 151 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SEC61A1P61619 476 aaKnown RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 TSPAN31Q12999 210 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 MLLT11Q13015 90 aaPredicted RBP8.09□□□□□ -1.11
PTCD3-201ENST00000254630 GDPGP1Q6ZNW5 385 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SLCO4C1Q6ZQN7 724 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 SLC22A12Q96S37 553 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 PGAP2Q9UHJ9 254 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ZNF587BE7ETH6 402 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 ALOX12BO75342 701 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 PRKACBP22694 351 aa8.09□□□□□ -1.11
PTCD3-201ENST00000254630 CRHBPP24387 322 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms