RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TIMP1P01033 207 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 PRKAR1BP31321 381 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 ARL6IP1Q15041 203 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 RPE65Q16518 533 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 LPAL2Q16609 132 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 SFXN4Q6P4A7 337 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 FUNDC1Q8IVP5 155 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 PIGCQ92535 297 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 GHSRQ92847 366 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 NUP98P52948 1817 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 ZNF705GA8MUZ8 300 aaPredicted RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 LILRB3O75022 631 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 ERVK-16P61578 105 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 CNN3Q15417 329 aaKnown RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 ZNF852Q6ZMS4 543 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 MFSD9Q8NBP5 474 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 HSD17B8Q92506 261 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 CCNL2Q96S94 520 aaPredicted RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 MICU1Q9BPX6 476 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 ARGFXA6NJG6 315 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 PEX14O75381 377 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 STK17BO94768 372 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 SNAPINO95295 136 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 CHRM4P08173 479 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 SMIM18P0DKX4 95 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 LIPAP38571 399 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 OR1D4P47884 311 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 RPS18P62269 152 aaKnown RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 PEA15Q15121 130 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 ADPRMQ3LIE5 342 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 FAM111BQ6SJ93 734 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 PLCXD1Q9NUJ7 323 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 PRAMEF27A3QJZ7 478 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 ANKRD30BLA7E2S9 258 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 HIDE1A8MVS5 230 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 OPCMLQ14982 345 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 PLGLAQ15195 96 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 PRAMEF9Q5VWM5 478 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 HAVCR2Q8TDQ0 301 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 TOE1Q96GM8 510 aaKnown RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 RNF32Q9H0A6 362 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 ACSS1Q9NUB1 689 aaPredicted RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 MYO10Q9HD67 2058 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 HSPB6O14558 160 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 OIP5O43482 229 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 OR2T1O43869 369 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 RAB40ALP0C0E4 278 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 IDO2Q6ZQW0 420 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 RAB40AQ8WXH6 277 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 DVL3Q92997 716 aaPredicted RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 HRASLS5Q96KN8 279 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 RNF167Q9H6Y7 350 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 KLHL42Q9P2K6 505 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 PTRH2Q9Y3E5 179 aaKnown RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 TMEM82A0PJX8 343 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 LAMTOR5O43504 91 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 SRP9P49458 86 aaKnown RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 RPL23AP62750 156 aaKnown RBP12.45□□□□□ -0.42
NEK4-201ENST00000233027 MBOAT2Q6ZWT7 520 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 OR6F1Q8NGZ6 308 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 ABHD4Q8TB40 342 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 RSPRY1Q96DX4 576 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 FCRL1Q96LA6 429 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 NICN1Q9BSH3 213 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 SLC6A20Q9NP91 592 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 TMEM100Q9NV29 134 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 RLIMQ9NVW2 624 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 SCML1Q9UN30 329 aa12.45□□□□□ -0.42
NEK4-201ENST00000233027 A0A1W2PS29 197 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 TMEM189-UBE2V1I3L0A0 370 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 SUSD5O60279 629 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 GPR75O95800 540 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 PPP3CBP16298 524 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 HTD2P86397 168 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 TNFRSF17Q02223 184 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 TMEM207Q6UWW9 146 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ZNF740Q8NDX6 193 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 NMNAT3Q96T66 252 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 WDR83Q9BRX9 315 aaKnown RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 TUBG2Q9NRH3 451 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 CHD4Q14839 1912 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 PIGBOS1A0A0B4J2F0 54 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 H0YGG7 62 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 H0YIV9 168 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ACTL6BO94805 426 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 HBQ1P09105 142 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 EIF2DP41214 584 aaKnown RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 FOLR3P41439 243 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 C3orf38Q5JPI3 329 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 HBMQ6B0K9 141 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 ESPNLQ6ZVH7 1005 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 LYSMD2Q8IV50 215 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 OR4K15Q8NH41 348 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 TM9SF4Q92544 642 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 RSC1A1Q92681 617 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 GIMAP5Q96F15 307 aa12.44□□□□□ -0.42
NEK4-201ENST00000233027 LIN37Q96GY3 246 aaPredicted RBP12.44□□□□□ -0.42
NEK4-201ENST00000233027 ELF4Q99607 663 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms