RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Defb22Q8BVC1 179 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Poglut1Q8BYB9 392 aaKnown RBP9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Zim1Q8C393 579 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm9999Q8C5Y2 53 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 TbceQ8CIV8 524 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gpr18Q8K1Z6 331 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sf3b4Q8QZY9 424 aaKnown RBP9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Dusp15Q8R4V2 235 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Stard5Q9EPQ7 213 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 C1galt1Q9JJ06 363 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc30a7Q9JKN1 378 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Adam26aQ9R158 697 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cdh20Q9Z0M3 801 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm3685J3QPP2 205 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Papss2O88428 621 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hoxa9P09631 271 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hoxd4P10628 250 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mfsd2bQ3T9M1 494 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 CalcrQ60755 533 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Galk2Q68FH4 458 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Adam30Q811Q3 732 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 NelfaQ8BG30 530 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc6a17Q8BJI1 727 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sertm1Q8CD78 107 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr514Q8VFZ6 310 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1395Q8VGD7 317 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 PxnQ8VI36 591 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 MallQ91X49 154 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Acy3Q91XE4 318 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Ndufb2Q9CPU2 105 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 NpvfQ9ESQ8 188 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Usp18Q9WTV6 368 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rgs21V9GXQ3 152 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 4930426L09RikE9Q0N7 123 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm2075J3QMW5 144 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rpl7P14148 270 aaKnown RBP9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 KitlgP20826 273 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Bmp7P23359 430 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Il1r2P27931 410 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Folr1P35846 255 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tcf7Q00417 419 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Mmp7Q10738 264 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm2016Q3TQZ4 144 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm648Q3UJ22 213 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm10696Q3UTC4 357 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Rnase12Q5GAM8 145 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Pou4f3Q63955 338 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 B430306N03RikQ6QX36 289 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr320Q7TRZ4 306 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr270Q7TS19 314 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Lypd4Q8BVP6 246 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sav1Q8VEB2 386 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Galnt11Q921L8 608 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Trappc2Q9CQP2 140 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Naalad2Q9CZR2 740 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Efcab11Q9D0E5 162 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Q9DAR0 182 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tsc22d4Q9EQN3 387 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr71Q9QZ18 312 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 PlpbpQ9Z2Y8 274 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Pde4dipQ80YT7 2224 aa9.3□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Apc2Q9Z1K7 2274 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 CK137956B1AYM9 596 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cd209fD3Z1H5 274 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tmem44E9Q4M0 433 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Edil3O35474 480 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Bcl2l11O54918 196 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Tmprss11cQ1JRP2 431 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hspb6Q5EBG6 162 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Havcr1Q5QNS5 305 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sqstm1Q64337 442 aaKnown RBP9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 ExogQ8C163 368 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gpn1Q8VCE2 372 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr551Q8VG23 315 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fam3cQ91VU0 227 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Cers4Q9D6J1 393 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1056A2AVY0 313 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fbxw24E9PXM9 466 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gm6619F6URP1 175 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 FurinP23188 793 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Sox1P53783 391 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Wdr20Q3UWE6 569 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Slc6a5Q761V0 799 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr309Q7TS01 308 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Gpr68Q8BFQ3 365 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fbxl3Q8C4V4 428 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Ccdc187Q8C5V8 958 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Vmn1r6Q8R2D4 303 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr437Q8VEV1 310 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr518Q8VEW1 333 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Olfr1263Q8VG63 306 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Lrg1Q91XL1 342 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 WacQ924H7 646 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Hint3Q9CPS6 165 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fbxo36Q9CQ24 188 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 S100a16Q9D708 124 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fam13cQ9DBR2 601 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Nqo2Q9JI75 231 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 Fiz1Q9WTJ4 500 aa9.29□□□□□ -0.92
Ldlr-201ENSMUST00000034713 B4galt2Q9Z2Y2 369 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms