RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Papss2O88428 621 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 RabggtbP53612 339 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Kcnk6Q3TBV4 313 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Mfsd12Q3U481 476 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Dnaaf3Q3UYV8 586 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Frg2f1Q6P3A2 227 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Slc6a7Q6PGE7 637 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Pum1Q80U78 1189 aaKnown RBP17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Ankmy1Q8C0W1 906 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gramd1cQ8CI52 457 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tmem242Q8VCR3 140 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Olfr272Q8VGA0 319 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Satb2Q8VI24 733 aa17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Thumpd1Q99J36 350 aaKnown RBP17.34■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm21854A0A087WNM4 232 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm364A2AFI6 671 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm266A6H634 200 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Saxo1B1AXP3 476 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Fbxw24E9PXM9 466 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Esp36G3UZD8 160 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Cacng2O88602 323 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Best1O88870 551 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 FcamrQ2TB54 535 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Dus4lQ32M08 324 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Mansc4Q3UU94 337 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Ankrd53Q3V0J4 497 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Cd47Q61735 303 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Smad2Q62432 467 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 PtprcapQ64697 197 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Eid2Q6X7S9 236 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 BspryQ80YW5 473 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Tmem38bQ9DAV9 292 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 RgccQ9DBX1 137 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Rnf32Q9JIT1 368 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 RbpmsQ9WVB0 197 aaKnown RBP17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 9930021J03RikH3BKP8 2027 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Lrrk1Q3UHC2 2014 aa17.33■□□□□ 0.37
Shkbp1-201ENSMUST00000003857 Gm21865A0A087WRL2 222 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc37a4A0A1L1SUI3 450 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dmrtb1A2A9I7 359 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fam209A2APA5 170 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm1330D3Z460 184 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 GlsD3Z7P3 674 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm45062E0CZ38 131 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm1110F6Y113 635 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fcn2O70497 314 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tmco2P0C1V4 183 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 FahP35505 419 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Efnb1P52795 345 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Crmp1P97427 572 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fads2p1Q0VAX3 487 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc25a40Q8BGP6 337 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Zfp763Q8BIC7 588 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dlgap5Q8K4R9 808 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Mboat2Q8R3I2 519 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tsen15Q8R3W5 168 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc22a6Q8VC69 545 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Egln3Q91UZ4 239 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Pdzk1ip1Q9CQH0 114 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dnmt3lQ9CWR8 421 aaKnown RBP17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Med31Q9CXU1 131 aaKnown RBP17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Rnf186Q9D241 226 aa17.33■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Igkv6-20A0A140T8P2 115 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 H2-M11F6U8V3 335 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Prl4a1O35256 227 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Nckap1P28660 1128 aaKnown RBP17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 CcnjQ3TZI6 379 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ankrd37Q569N2 159 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Acvr1bQ61271 505 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ticam1Q80UF7 732 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 DgkzQ80UP3 929 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc31a1Q8K211 196 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Mmd2Q8R189 247 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Lipt1Q8VCM4 373 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Sntg1Q925E1 517 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 2410137M14RikQ9CWF0 162 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Lrit3W8DXL4 681 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr485A0A140LJF5 317 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Scgb2b3D2XZ38 112 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Zfp141G3UY09 685 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ms4a18J3QN01 344 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 CtslP06797 334 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Zdhhc2P59267 366 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dlx5P70396 289 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Opa3Q505D7 179 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Fut10Q5F2L2 481 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Klhl6Q6V595 619 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm5346Q7M766 736 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Hpf1Q8CFE2 346 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Csnka2ipQ8CH19 720 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Mrpl38Q8K2M0 380 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr583Q8VG25 319 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cyp2d22Q9JKY7 500 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Syt8Q9R0N6 395 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 RlimQ9WTV7 600 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 PtgfrnQ9WV91 879 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 NfkbiaQ9Z1E3 314 aa17.32■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Igkv12-38A0A0G2JEI7 115 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm4924A0A1B0GR71 966 aa17.31■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm14085A2AWR5 660 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms