RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 FOXK1P85037 733 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 CDK5Q00535 292 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 CRYZQ08257 329 aaKnown RBP11.91□□□□□ -0.5
PHGDH-221ENST00000641573 APOFQ13790 326 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 OR5M10Q6IEU7 315 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 CASP12Q6UXS9 341 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 ZNF620Q6ZNG0 422 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 PTCHD4Q6ZW05 846 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 TMEM156Q8N614 296 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 CLDN22Q8N7P3 220 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 BPIFB6Q8NFQ5 453 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 BRIX1Q8TDN6 353 aaKnown RBP11.91□□□□□ -0.5
PHGDH-221ENST00000641573 APH1BQ8WW43 257 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 OSTF1Q92882 214 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 SGTBQ96EQ0 304 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 PSMG3-AS1Q96PY0 264 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 TSSK6Q9BXA6 273 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 SLC19A3Q9BZV2 496 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 BATF3Q9NR55 127 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 TBC1D23Q9NUY8 699 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 TAS2R10Q9NYW0 307 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 MED11Q9P086 117 aa11.91□□□□□ -0.5
PHGDH-221ENST00000641573 CHCHD2Q9Y6H1 151 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-221ENST00000641573 A0A087WXM4 84 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 IGLV3-32A0A0A0MS00 114 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 MPZL2O60487 215 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 CDC40O60508 579 aaKnown RBP eCLIP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 WBP4O75554 376 aaKnown RBP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 CCDC159P0C7I6 412 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 SAGP10523 405 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 LIFP15018 202 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 ATP6V1B1P15313 513 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 GABRB1P18505 474 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 FUT1P19526 365 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 MSX1P28360 303 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 HLCSP50747 726 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 SMSP52788 366 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 CXCR4P61073 352 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 TEKQ02763 1124 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 SRSF6Q13247 344 aaKnown RBP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 IGFBP7Q16270 282 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 B3GNTL1Q67FW5 361 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 ACSM5Q6NUN0 579 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 SLC30A6Q6NXT4 461 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 JMJD6Q6NYC1 403 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 SIRT6Q8N6T7 355 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 OR13C2Q8NGS9 318 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 FANK1Q8TC84 345 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 ZNF566Q969W8 418 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 THOC3Q96J01 351 aaKnown RBP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 SAMD8Q96LT4 415 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 SECISBP2Q96T21 854 aaKnown RBP11.9□□□□□ -0.5
PHGDH-221ENST00000641573 TMEM43Q9BTV4 400 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 HPF1Q9NWY4 346 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 IL20Q9NYY1 176 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 OSGIN1Q9UJX0 560 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 BLOC1S6Q9UL45 172 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 HRH3Q9Y5N1 445 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 WIF1Q9Y5W5 379 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 EXPH5Q8NEV8 1989 aa11.9□□□□□ -0.5
PHGDH-221ENST00000641573 BSNQ9UPA5 3926 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 HTR3EA5X5Y0 456 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 B4DXG7 233 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 XPNPEP2O43895 674 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 HCN1O60741 890 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 FAM20BO75063 409 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 OR7A10O76100 309 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 RCBTB2O95199 551 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CLPTM1O96005 669 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CCNA2P20248 432 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 EEF1B2P24534 225 aaKnown RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CXCR1P25024 350 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 POLR2HP52434 150 aaKnown RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 GABARAPL2P60520 117 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 SNRPGP62308 76 aaKnown RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 SNTA1Q13424 505 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 SMN1Q16637 294 aaKnown RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CLEC12AQ5QGZ9 265 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 ACER2Q5QJU3 275 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 DCAF10Q5QP82 559 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 ZNF468Q5VIY5 522 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 PRAMEF20Q5VT98 475 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 RPL13AP3Q6NVV1 102 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 SLC27A4Q6P1M0 643 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 TMEM81Q6P7N7 255 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CLEC18BQ6UXF7 455 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 GRINAQ7Z429 371 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 VASH2Q86V25 355 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CCDC103Q8IW40 242 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 OR4Q3Q8NH05 313 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 TRUB1Q8WWH5 349 aaKnown RBP11.89□□□□□ -0.51
PHGDH-221ENST00000641573 TMEM234Q8WY98 164 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 ST8SIA1Q92185 356 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 PSMF1Q92530 271 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 OR52D1Q9H346 318 aa11.89□□□□□ -0.51
PHGDH-221ENST00000641573 HHATLQ9HCP6 504 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms