RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 GPN3Q9UHW5 284 aaPredicted RBP9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 PCOLCE2Q9UKZ9 415 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 PCDHB8Q9UN66 801 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 PDCD11Q14690 1871 aaKnown RBP9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 RIIAD1A6NNX1 92 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 M0R036 132 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 SYT5O00445 386 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 SURF4O15260 269 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 STC2O76061 302 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 HMGN2P05204 90 aaKnown RBP9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 CSF2RAP15509 400 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 VAMP1P23763 118 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 ITGB8P26012 769 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 OR1D2P34982 312 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 DLSTP36957 453 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 DEFA6Q01524 100 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 AADACL4Q5VUY2 407 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 TMEM173Q86WV6 379 aaPredicted RBP9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 CDK20Q8IZL9 346 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 GLYATL2Q8WU03 294 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 CNTNAP3BQ96NU0 1288 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 ZNF559Q9BR84 538 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 RSPO3Q9BXY4 272 aaPredicted RBP9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 TLNRD1Q9H1K6 362 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 ANKRD19PQ9H560 264 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 TCF7L1Q9HCS4 588 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 NOX4Q9NPH5 578 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 RPS10P5Q9NQ39 176 aa9.06□□□□□ -0.96
TNFAIP3-210ENST00000620204 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TMEM218A2RU14 115 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 C5orf51A6NDU8 294 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 ZNF879B4DU55 563 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 SNAPINO95295 136 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 CD160O95971 181 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 UBBP0CG47 229 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 UBCP0CG48 685 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 CST5P28325 142 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 HLA-FP30511 346 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 NTSP30990 170 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 MPIP34949 423 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 SLC11A1P49279 550 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 GAS1P54826 345 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 RAG2P55895 527 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 ADAM5Q6NVV9 412 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 FIGNL1Q6PIW4 674 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 MEPCEQ7L2J0 689 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 DCUN1D3Q8IWE4 304 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 STK35Q8TDR2 534 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 NRTNQ99748 197 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 C20orf24Q9BUV8 137 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 CHST6Q9GZX3 395 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 ENKD1Q9H0I2 346 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 SLC38A1Q9H2H9 487 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 OR52D1Q9H346 318 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 FN3KQ9H479 309 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 ZFP57Q9NU63 452 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 ABRACLQ9P1F3 81 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 MOKQ9UQ07 419 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 SLC38A8A6NNN8 435 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 KDM4EB2RXH2 506 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 GALR3O60755 368 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 LATS1O95835 1130 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 ITPKBP27987 946 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 CTSOP43234 321 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 UBXN2BQ14CS0 331 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 USF2Q15853 346 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 FNDC3BQ53EP0 1204 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TMEM151BQ8IW70 566 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 FOXRED2Q8IWF2 684 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 LINC00471Q8N535 108 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 NEURL3Q96EH8 262 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 HHIPQ96QV1 700 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 CD180Q99467 661 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 ZNF251Q9BRH9 671 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 EFCAB11Q9BUY7 163 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TGIF2Q9GZN2 237 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 SLC25A32Q9H2D1 315 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 MAN2C1Q9NTJ4 1040 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 GPR55Q9Y2T6 319 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TSC2P49815 1807 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TRAV18A0A075B6X5 111 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TRAV27A0A087WT01 109 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 H7BY64 318 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 GFYI3L273 518 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 PPM1DO15297 605 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 RPLP2P05387 115 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 GKN3PP0CG01 181 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 VSIG10L2P0DP72 767 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 CDK2P24941 298 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 S100PP25815 95 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 AIMP2Q13155 320 aaKnown RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TGIF1Q15583 401 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 NKPD1Q17RQ9 610 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 TMEM44Q2T9K0 475 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 B3GNTL1Q67FW5 361 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 FUT10Q6P4F1 479 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 RNF165Q6ZSG1 346 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 IL17RCQ8NAC3 791 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 GRHL3Q8TE85 626 aa9.05□□□□□ -0.96
TNFAIP3-210ENST00000620204 CXorf40BQ96DE9 158 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms