RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SLAMF1Q13291 335 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CTSL3PQ5NE16 218 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PLEKHG7Q6ZR37 379 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GOLM1Q8NBJ4 401 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR51A2Q8NGJ7 313 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GPR150Q8NGU9 434 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR6N2Q8NGY6 317 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 POLR2J2Q9GZM3 115 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 POLR2J3Q9H1A7 115 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 ZCCHC4Q9H5U6 513 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MARCH7Q9H992 704 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PRAMEF27A3QJZ7 478 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR6C68A6NDL8 312 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SLC16A8O95907 504 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 HOXA1P49639 335 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 RIPPLY3P57055 190 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GPR18Q14330 331 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SCRN2Q96FV2 425 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TMEM41AQ96HV5 264 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 DHCR7Q9UBM7 475 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 TRIM49D1C9J1S8 452 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GADD45GO95257 159 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 IFNA1P01562 189 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PIRTP0C851 137 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PKLRP30613 574 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MS4A2Q01362 244 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 LIPEQ05469 1076 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PCOLCEQ15113 449 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 KCNMB1Q16558 191 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR2T4Q8NH00 348 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SLC35A5Q9BS91 424 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TMUB1Q9BVT8 246 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SLC38A1Q9H2H9 487 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 HEXA-AS1Q9H8Q6 139 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 C1orf109Q9NX04 203 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF639Q9UID6 485 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SPTY2D1-AS1A0A0U1RR47 76 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 RPS10-NUDT3A0A1W2PQS6 291 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF487B1APH4 448 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF264O43296 627 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 NTRK3Q16288 839 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SCD5Q86SK9 330 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SPPL2CQ8IUH8 684 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PSMF1Q92530 271 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 S1PR3Q99500 378 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CNTNAP3Q9BZ76 1288 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ISCUQ9H1K1 167 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MKLN1Q9UL63 735 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 LRRN3E7EW58 273 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CRTAPO75718 401 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 CD69Q07108 199 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 VMACQ2NL98 169 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ENTPD8Q5MY95 495 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 N4BP2L1Q5TBK1 243 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF57Q68EA5 555 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 FCRLAQ7L513 359 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SFXN5Q8TD22 340 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF251Q9BRH9 671 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 RHOJQ9H4E5 214 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 NARFLQ9H6Q4 476 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 VRTNQ9H8Y1 702 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SMCO3A2RU48 225 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 HCRTR1O43613 425 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 ZNF780AO75290 641 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 PRLHRP49683 370 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GPX6P59796 221 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GPR19Q15760 415 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR6Q1Q8NGQ2 317 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PNPT1Q8TCS8 783 aaKnown RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 AP5S1Q9NUS5 200 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PCDHA9Q9Y5H5 950 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 IGLV3-22A0A075B6J6 115 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TRGV10A0A0A0MS01 117 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TRAV38-1A0A0B4J264 116 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 EFCAB9A8MZ26 197 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MMP12P39900 470 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TGM4P49221 684 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 P2RX1P51575 399 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SOWAHAQ2M3V2 549 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 IAH1Q2TAA2 248 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 GUSBP11Q6P575 273 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 DPY19L4Q7Z388 723 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 PRSS42Q7Z5A4 293 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 DTX2Q86UW9 622 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 TMEM185BQ9H7F4 350 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 GALNT9Q9HCQ5 603 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MAN2C1Q9NTJ4 1040 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 USP3Q9Y6I4 520 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MAGEA13PA6NCF6 341 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SLC19A2O60779 497 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 SERPINA7P05543 415 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 CHRM5P08912 532 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 TNFAIP6P98066 277 aaPredicted RBP3.1□□□□□ -1.91
LPP-220ENST00000617246 GLO1Q04760 184 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 MICAQ29983 383 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 RAB41Q5JT25 222 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 DCDC5Q6ZRR9 648 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 DOLPP1Q86YN1 238 aa3.1□□□□□ -1.91
LPP-220ENST00000617246 OR5B17Q8NGF7 314 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms