RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ANKRD10Q9NXR5 420 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ATG2BQ96BY7 2078 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF432O94892 652 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 IDUAP35475 653 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 SRP9P49458 86 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 SNRPGP62308 76 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 DLX2Q07687 328 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 FGL2Q14314 439 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 TMEM164Q5U3C3 297 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 FCRL6Q6DN72 434 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 TCTN3Q6NUS6 607 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 KCTD18Q6PI47 426 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 GLCCI1Q86VQ1 547 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 OR5L2Q8NGL0 311 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 RHBDD1Q8TEB9 315 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 CCDC74AQ96AQ1 378 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 INTS14Q96SY0 518 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 LYRM4Q9HD34 91 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF701Q9NV72 531 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 METTL15A6NJ78 407 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 GALR3O60755 368 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 TRHRP34981 398 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 FRKP42685 505 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 MRPL19P49406 292 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 PLK5Q496M5 336 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 C3orf38Q5JPI3 329 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 NXNL2Q5VZ03 156 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF322Q6U7Q0 402 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 BTLAQ7Z6A9 289 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC2A12Q8TD20 617 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 MGAT4CQ9UBM8 478 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 SZT2Q5T011 3432 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 WDPCPO95876 746 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 LCN1P31025 176 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ARPC4P59998 168 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 RASGEF1BQ0VAM2 473 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 NKPD1Q17RQ9 610 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ABCA11PQ4W5N1 156 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 APH1BQ8WW43 257 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ACOT12Q8WYK0 555 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 FAM46BQ96A09 425 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 PNPLA2Q96AD5 504 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 FAM71F1Q96KD3 344 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 OR14A2Q96R54 314 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 STRADBQ9C0K7 418 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 HPF1Q9NWY4 346 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 PFDN2Q9UHV9 154 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC6A14Q9UN76 642 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 MICAL3Q7RTP6 2002 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 TMEM72A0PK05 275 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC6A8P48029 635 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF81P51508 661 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 CEBPGP53567 150 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 HSD11B2P80365 405 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 DBPQ10586 325 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 CCINQ13939 588 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 PCGF3Q3KNV8 242 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 NDUFAF7Q7L592 441 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ETFBKMTQ8IXQ9 262 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 DNAJC5GQ8N7S2 189 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 COQ8AQ8NI60 647 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 LPAR4Q99677 370 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 TRAV18A0A075B6X5 111 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 AGAP14A8MT82 685 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 HCRTR1O43613 425 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ICOSLGO75144 302 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 CSTBP04080 98 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 LIPCP11150 499 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 CD27P26842 260 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 FOLR3P41439 243 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 POU3F1Q03052 451 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 SPOCK1Q08629 439 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 OR7E24Q6IFN5 339 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 NRARPQ7Z6K4 114 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 LINC00346Q8IVM7 164 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 KDM8Q8N371 416 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 KLHL15Q96M94 604 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 OR2A14Q96R47 310 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 TMEM246Q9BRR3 403 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 OR51B6Q9H340 312 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 UBQLN3Q9H347 655 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 PRDM7Q9NQW5 492 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 A4GNTQ9UNA3 340 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 EPOPA6NHQ4 379 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 DISC1C4P0D8 188 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF593O00488 134 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 SRPX2O60687 465 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 SPNP16150 400 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 HOXC12P31275 282 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 DUSP3P51452 185 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ACY1Q03154 408 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ATAD3CQ5T2N8 411 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 USP51Q70EK9 711 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 GDPD1Q8N9F7 314 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 GALNT11Q8NCW6 608 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 C7orf34Q96L11 122 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 HHATLQ9HCP6 504 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 FSCN3Q9NQT6 498 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 VSX1Q9NZR4 365 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms