RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	PGS1	Q32NB8	556 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	LSM12	Q3MHD2	195 aa	Known RBP	12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	AWAT1	Q58HT5	328 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ATG16L1	Q676U5	607 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	HIST2H2BD	Q6DRA6	164 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR4F3	Q6IEY1	312 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OGFOD2	Q6N063	350 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	THSD4	Q6ZMP0	1018 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	UBE2J2	Q8N2K1	259 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SLC43A2	Q8N370	569 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	COX18	Q8N8Q8	333 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR56A1	Q8NGH5	318 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	FBXO27	Q8NI29	283 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SFXN5	Q8TD22	340 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	JADE3	Q92613	823 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZNF524	Q96C55	264 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZNF696	Q9H7X3	374 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	DUSP22	Q9NRW4	184 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	KLHL9	Q9P2J3	617 aa		12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	MARCO	Q9UEW3	520 aa	Predicted RBP	12.01	□□□□□ -0.49
SHKBP1-208	ENST00000595726	HDAC3	O15379	428 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OIP5	O43482	229 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	STAMBP	O95630	424 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	KIT	P10721	976 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CDH15	P55291	814 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CD226	Q15762	336 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SPDYE7P	Q495Y7	208 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CCNJ	Q5T5M9	372 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CDC73	Q6P1J9	531 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SSX8	Q7RTT4	187 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CLECL1	Q8IZS7	167 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	WDR31	Q8NA23	367 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZNF540	Q8NDQ6	660 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR8J2	Q8NGG1	315 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR5AK3P	Q8NH89	298 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	B4GALNT2	Q8NHY0	566 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CDS1	Q92903	461 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TESC	Q96BS2	214 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	MOAP1	Q96BY2	351 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	STAC	Q99469	402 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ACTRT3	Q9BYD9	372 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	DPY30	Q9C005	99 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	PIGU	Q9H490	435 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	FKRP	Q9H9S5	495 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	GPATCH2	Q9NW75	528 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	GIN1	Q9NXP7	522 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	MOK	Q9UQ07	419 aa		12	□□□□□ -0.49
SHKBP1-208	ENST00000595726	RNASET2	O00584	256 aa	Known RBP	11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	KLF11	O14901	512 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CFLAR	O15519	480 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SCN2B	O60939	215 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	NGFR	P08138	427 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	EPHA3	P29320	983 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SOAT1	P35610	550 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CHN2	P52757	468 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	POU6F2	P78424	691 aa	Predicted RBP	11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CCNI	Q14094	377 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TRIP10	Q15642	601 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TOMM34	Q15785	309 aa	Predicted RBP	11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	GABRA6	Q16445	453 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TTMP	Q5BVD1	217 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	C9orf135	Q5VTT2	229 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	FBXW9	Q5XUX1	488 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	DEF8	Q6ZN54	512 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SLC46A3	Q7Z3Q1	461 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZNF418	Q8TF45	676 aa	Predicted RBP	11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZFP90	Q8TF47	636 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CHMP6	Q96FZ7	201 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ATP6V1G3	Q96LB4	118 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TEX37	Q96LM6	180 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	BTBD2	Q9BX70	525 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	AIG1	Q9NVV5	245 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	PCDHB10	Q9UN67	800 aa		11.99	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TRPC5OS	A6NMA1	111 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726		E9PBE3	544 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TRIM77	I1YAP6	450 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CYTIP	O60759	359 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	KRT16	P08779	473 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TACSTD2	P09758	323 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	LCN1	P31025	176 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	NTF4	P34130	210 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	EIF1	P41567	113 aa	Known RBP	11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CLNS1A	P54105	237 aa	Known RBP	11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	DVL1P1	P54792	670 aa	Predicted RBP	11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	RAC3	P60763	192 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SNRPD2	P62316	118 aa	Known RBP	11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SLC25A3	Q00325	362 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	DPY19L1	Q2PZI1	675 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SPANXN4	Q5MJ08	99 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	DCST2	Q5T1A1	773 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CBLN3	Q6UW01	205 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	TREML4	Q6UXN2	200 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	MAVS	Q7Z434	540 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SPATA19	Q7Z5L4	167 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	GALNT5	Q7Z7M9	940 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SVOPL	Q8N434	492 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ADAMTS15	Q8TE58	950 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	MAEL	Q96JY0	434 aa	Known RBP	11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms