RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 ACKR1Q16570 336 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 PAGE3Q5JUK9 113 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 LRIF1Q5T3J3 769 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 ZNF704Q6ZNC4 412 aaPredicted RBP13.33□□□□□ -0.28
NFIX-212ENST00000590027 Q6ZT83 130 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 KRTAP1-3Q8IUG1 177 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 CADM2Q8N3J6 435 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 WFDC11Q8NEX6 87 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 PIGXQ8TBF5 258 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 DDIT4LQ96D03 193 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 MAGEB18Q96M61 343 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 CCL19Q99731 98 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 POTEKPQ9BYX7 375 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 CACYBPQ9HB71 228 aaKnown RBP13.33□□□□□ -0.28
NFIX-212ENST00000590027 A4GALTQ9NPC4 353 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 SLAMF8Q9P0V8 285 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 TMEM181Q9P2C4 612 aa13.33□□□□□ -0.28
NFIX-212ENST00000590027 A0A0G2JPF8 293 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 HNRNPCL2B2RXH8 293 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 HNRNPCL3B7ZW38 293 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 ZNF208O43345 1280 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 HNRNPCL1O60812 293 aaKnown RBP13.32□□□□□ -0.28
NFIX-212ENST00000590027 SASH3O75995 380 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 HNRNPCL4P0DMR1 293 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 PRG2P13727 222 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 FKBP2P26885 142 aaKnown RBP13.32□□□□□ -0.28
NFIX-212ENST00000590027 ACAA2P42765 397 aaKnown RBP13.32□□□□□ -0.28
NFIX-212ENST00000590027 NR1H2P55055 460 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 ITGADQ13349 1161 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 P2RY6Q15077 328 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 PDK3Q15120 406 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 AGKQ53H12 422 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 C20orf204Q6ZNR8 217 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 BHLHA15Q7RTS1 189 aaPredicted RBP13.32□□□□□ -0.28
NFIX-212ENST00000590027 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 CCDC103Q8IW40 242 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 ZNF100Q8IYN0 542 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 C10orf111Q8N326 155 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 CLIP4Q8N3C7 705 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 BBS10Q8TAM1 723 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 SPATA9Q9BWV2 254 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 HDHD5Q9BXW7 423 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 SLC52A3Q9NQ40 469 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 VAPAQ9P0L0 249 aa13.32□□□□□ -0.28
NFIX-212ENST00000590027 NOSIPQ9Y314 301 aaKnown RBP13.32□□□□□ -0.28
NFIX-212ENST00000590027 ARID1AO14497 2285 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 TRBV5-3A0A0A0MS03 114 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 FRS3O43559 492 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 IGHV3-9P01782 118 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 ARAFP10398 606 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 COX5AP20674 150 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 FPR1P21462 350 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 IGHV1-2P23083 117 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 SLC16A1P53985 500 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 SLC35A1P78382 337 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 STK11Q15831 433 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 GCNT6Q5T4J0 391 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 PRAMEF8Q5VWM4 474 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 PRAMEF7Q5VXH5 474 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 WBP2NLQ6ICG8 309 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 SEZ6L2Q6UXD5 910 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 ATG4DQ86TL0 474 aaPredicted RBP13.31□□□□□ -0.28
NFIX-212ENST00000590027 NFKBIDQ8NI38 313 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 APH1AQ96BI3 265 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 TMEM204Q9BSN7 226 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 ADAM19Q9H013 955 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 IKZF5Q9H5V7 419 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 BCL2L10Q9HD36 194 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 TRAPPC4Q9Y296 219 aa13.31□□□□□ -0.28
NFIX-212ENST00000590027 C5orf58C9J3I9 102 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 SMPD2O60906 423 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 NCF2P19878 526 aaPredicted RBP13.3□□□□□ -0.28
NFIX-212ENST00000590027 CXCR1P25024 350 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 ADSLP30566 484 aaPredicted RBP13.3□□□□□ -0.28
NFIX-212ENST00000590027 HOXC12P31275 282 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 NTF4P34130 210 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 IDUAP35475 653 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 RIPPLY3P57055 190 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 COPZ1P61923 177 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 NKX6-1P78426 367 aaPredicted RBP13.3□□□□□ -0.28
NFIX-212ENST00000590027 H3F3AP84243 136 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 BNIP2Q12982 314 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 CAPRIN1Q14444 709 aaKnown RBP13.3□□□□□ -0.28
NFIX-212ENST00000590027 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 CASP12Q6UXS9 341 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 STON2Q8WXE9 905 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 PIGTQ969N2 578 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 C3orf49Q96BT1 292 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 PIP5K1AQ99755 562 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 ZNF385DQ9H6B1 395 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 NPHS2Q9NP85 383 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 DLL4Q9NR61 685 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.3□□□□□ -0.28
NFIX-212ENST00000590027 DCTN4Q9UJW0 460 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 ZNF232Q9UNY5 417 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 IFT52Q9Y366 437 aa13.3□□□□□ -0.28
NFIX-212ENST00000590027 LIPT2A6NK58 231 aa13.29□□□□□ -0.28
NFIX-212ENST00000590027 GPR171O14626 319 aa13.29□□□□□ -0.28
NFIX-212ENST00000590027 EIF1BO60739 113 aaKnown RBP13.29□□□□□ -0.28
NFIX-212ENST00000590027 EDF1O60869 148 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms