RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 ZNF443Q9Y2A4 671 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 H0YIV9 168 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 SURF4O15260 269 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 GPR137BO60478 399 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 GYPBP06028 91 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 CX3CR1P49238 355 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 EVX1P49640 407 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 SOWAHCQ53LP3 525 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 PDSS1Q5T2R2 415 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 NLGN4XQ8N0W4 816 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 ZSCAN4Q8NAM6 433 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 OR1S1Q8NH92 325 aa13.66□□□□□ -0.22
SMARCA4-214ENST00000589677 C17orf113A0A1B0GUU1 675 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 RGS13O14921 159 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 PAPLNO95428 1278 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 TMEM225BP0DP42 221 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 CBR1P16152 277 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 MSR1P21757 451 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 POU3F4P49335 361 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 Q499Y3 187 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF776Q68DI1 518 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SCD5Q86SK9 330 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 TRAPPC6BQ86SZ2 158 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 OR51D1Q8NGF3 324 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 OR9A2Q8NGT5 310 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 CAPNS2Q96L46 248 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 WDR77Q9BQA1 342 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 OR52A5Q9H2C5 316 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 C1orf123Q9NWV4 160 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 TIMM8BQ9Y5J9 83 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 A6NIZ1 184 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 FXYD4P59646 89 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 RAP1BP61224 184 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 RAP1AP62834 184 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 GBX1Q14549 363 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 EBPQ15125 230 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 MBOAT2Q6ZWT7 520 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 KDM8Q8N371 416 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 NANPQ8TBE9 248 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 ASB13Q8WXK3 278 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 IRF7Q92985 503 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SLIRPQ9GZT3 109 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF768Q9H5H4 540 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 A4GALTQ9NPC4 353 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 TMEM100Q9NV29 134 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF337Q9Y3M9 751 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 TMEM212A6NML5 194 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 CPT2P23786 658 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SLC19A1P41440 591 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SIM1P81133 766 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SNTB1Q13884 538 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SLC9A3R2Q15599 337 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 ADAM5Q6NVV9 412 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 P4HA3Q7Z4N8 544 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 CDH26Q8IXH8 852 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 CMIPQ8IY22 773 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 NIPSNAP3BQ9BS92 247 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 ANKRD19PQ9H560 264 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 MEIS3P2A8K0S8 358 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 CA12O43570 354 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 MT-CO2P00403 227 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 THBS2P35442 1172 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 TGFBR1P36897 503 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 TLE4Q04727 773 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 GRM7Q14831 915 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 NFATC4Q14934 902 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 ZNF705AQ6ZN79 300 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 OR4N5Q8IXE1 308 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 LFNGQ8NES3 379 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 SERINC2Q96SA4 455 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 OCSTAMPQ9BR26 566 aa13.65□□□□□ -0.22
SMARCA4-214ENST00000589677 CCR7P32248 378 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 GLO1Q04760 184 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 ZMAT1Q5H9K5 638 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 OVCH1Q7RTY7 1134 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 PLPP5Q8NEB5 264 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 UCN3Q969E3 161 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 PLEKHJ1Q9NW61 149 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 PRSS21Q9Y6M0 314 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 LAMB4A4D0S4 1761 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 TRAV27A0A087WT01 109 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 PLCXD2Q0VAA5 305 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 OR1Q1Q15612 314 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 SBSNQ6UWP8 590 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 ZNF561Q8N587 486 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 FAM26EQ8N5C1 309 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 FRMD1Q8N878 549 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 OR7D2Q96RA2 312 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 FBXO7Q9Y3I1 522 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 ACOD1A6NK06 481 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 TRIM77I1YAP6 450 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 ADH1BP00325 375 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 HOXC8P31273 242 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 MFGE8Q08431 387 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 DPPA2Q7Z7J5 298 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 VRK2Q86Y07 508 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 OR4K15Q8NH41 348 aa13.64□□□□□ -0.23
SMARCA4-214ENST00000589677 ABI3Q9P2A4 366 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms