RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 GSX1Q9H4S2 264 aaPredicted RBP11.66□□□□□ -0.54
H3F3B-205ENST00000587171 SLCO1B3Q9NPD5 702 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 NGBQ9NPG2 151 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 TCF7L2Q9NQB0 619 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 RLIMQ9NVW2 624 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 THUMPD1Q9NXG2 353 aaKnown RBP11.66□□□□□ -0.54
H3F3B-205ENST00000587171 TMEM181Q9P2C4 612 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 PRDM4Q9UKN5 801 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 PCDHB14Q9Y5E9 798 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
H3F3B-205ENST00000587171 TMEM72A0PK05 275 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 GPR171O14626 319 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 POLR3GO15318 223 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 RAMP1O60894 148 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 LYZL6O75951 148 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 THBS1P07996 1170 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 IMPDH2P12268 514 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 UQCRBP14927 111 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 HOXB9P17482 250 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 CCNA2P20248 432 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 IGHV1-2P23083 117 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 RGNQ15493 299 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 TTMPQ5BVD1 217 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 RNF220Q5VTB9 566 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ALKBH2Q6NS38 261 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ADAM5Q6NVV9 412 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ZNF836Q6ZNA1 936 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 BIVMQ86UB2 503 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 LSRQ86X29 649 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 VRK2Q86Y07 508 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 CCDC103Q8IW40 242 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ZNF100Q8IYN0 542 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 DDIT4LQ96D03 193 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 PERPQ96FX8 193 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 TMEM19Q96HH6 336 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ADAM19Q9H013 955 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 PAIP1Q9H074 479 aaKnown RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ESRP2Q9H6T0 727 aaKnown RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 ZNF443Q9Y2A4 671 aaPredicted RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 NOSIPQ9Y314 301 aaKnown RBP11.65□□□□□ -0.54
H3F3B-205ENST00000587171 RNF115Q9Y4L5 304 aa11.65□□□□□ -0.54
H3F3B-205ENST00000587171 HIVEP2P31629 2446 aa11.65□□□□□ -0.55
H3F3B-205ENST00000587171 ALPK2Q86TB3 2170 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 A0A0G2JPF8 293 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 ZC3H12DA2A288 527 aaKnown RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 HNRNPCL2B2RXH8 293 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 HNRNPCL3B7ZW38 293 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 EIF1BO60739 113 aaKnown RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 HNRNPCL1O60812 293 aaKnown RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 TMCC2O75069 709 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 PGM3O95394 542 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 GKN3PP0CG01 181 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 HNRNPCL4P0DMR1 293 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 BMP2P12643 396 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 PAX1P15863 534 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 NTF4P34130 210 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 ACAA2P42765 397 aaKnown RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 IDH3AP50213 366 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 OR2B6P58173 313 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 STX1BP61266 288 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 SLC35A1P78382 337 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 FADDQ13158 208 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 LARS2Q15031 903 aaKnown RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 RPS26P11Q5JNZ5 115 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 TIMM23BQ5SRD1 257 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 FBXW9Q5XUX1 488 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 SLC2A7Q6PXP3 512 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 SSX8Q7RTT4 187 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 FUNDC1Q8IVP5 155 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 ZNF433Q8N7K0 673 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 LILRB1Q8NHL6 650 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 TMEM171Q8WVE6 324 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 AKAP1Q92667 903 aaKnown RBP eCLIP11.64□□□□□ -0.55
H3F3B-205ENST00000587171 APH1AQ96BI3 265 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 EBF4Q9BQW3 602 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 CCDC28BQ9BUN5 200 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 MALT1Q9UDY8 824 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 CHST2Q9Y4C5 530 aa11.64□□□□□ -0.55
H3F3B-205ENST00000587171 SONP18583 2426 aaKnown RBP11.63□□□□□ -0.55
H3F3B-205ENST00000587171 A0A096LPI6 279 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 TMEM247A6NEH6 219 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 CLIC1O00299 241 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 MRPL33O75394 65 aaKnown RBP11.63□□□□□ -0.55
H3F3B-205ENST00000587171 IGHV3-9P01782 118 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 CD3EP07766 207 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 INHBBP09529 407 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 NUDT7P0C024 238 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 GGT1P19440 569 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 PTH2RP49190 550 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 BSPH1Q075Z2 132 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 CAPRIN1Q14444 709 aaKnown RBP11.63□□□□□ -0.55
H3F3B-205ENST00000587171 PPA1Q15181 289 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 STK11Q15831 433 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 LRIF1Q5T3J3 769 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 PRAMEF8Q5VWM4 474 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 PRAMEF7Q5VXH5 474 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 WBP2NLQ6ICG8 309 aa11.63□□□□□ -0.55
H3F3B-205ENST00000587171 BLOC1S3Q6QNY0 202 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms