RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 NACC2Q96BF6 587 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 NMD3Q96D46 503 aaKnown RBP18.6■□□□□ 0.57
ATG4D-204ENST00000586417 ZNF582Q96NG8 517 aaPredicted RBP18.6■□□□□ 0.57
ATG4D-204ENST00000586417 DEFB126Q9BYW3 111 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 CCDC86Q9H6F5 360 aaKnown RBP18.6■□□□□ 0.57
ATG4D-204ENST00000586417 DOCK10Q96BY6 2186 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 URB1O60287 2271 aaKnown RBP18.6■□□□□ 0.57
ATG4D-204ENST00000586417 MGAQ8IWI9 3026 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 HCN1O60741 890 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 OR2J2O76002 312 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 PRKAR1AP10644 381 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 IRF3Q14653 427 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 TOMM34Q15785 309 aaPredicted RBP18.6■□□□□ 0.57
ATG4D-204ENST00000586417 TBCEQ15813 527 aaPredicted RBP18.6■□□□□ 0.57
ATG4D-204ENST00000586417 GPR107Q5VW38 600 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 PLAG1Q6DJT9 500 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 SMARCD3Q6STE5 483 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 CCDC81Q6ZN84 652 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 RAB43Q86YS6 212 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 STX19Q8N4C7 294 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 RORBQ92753 470 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 ISOC1Q96CN7 298 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 SGTBQ96EQ0 304 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 TMEM43Q9BTV4 400 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 CXorf56Q9H5V9 222 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 C12orf10Q9HB07 376 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 MED17Q9NVC6 651 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 GPR52Q9Y2T5 361 aa18.6■□□□□ 0.57
ATG4D-204ENST00000586417 ELOA3DA6NLF2 546 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-204ENST00000586417 KDM4EB2RXH2 506 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-204ENST00000586417 ZNF701M0R085 212 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-204ENST00000586417 MAN1A2O60476 641 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 IGF2P01344 180 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 DBTP11182 482 aaKnown RBP18.59■□□□□ 0.57
ATG4D-204ENST00000586417 GAS1P54826 345 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 EXT1Q16394 746 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 ELOA3BQ3SY89 546 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 SYT6Q5T7P8 510 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-204ENST00000586417 NUP54Q7Z3B4 507 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 SLC46A3Q7Z3Q1 461 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 OAFQ86UD1 273 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 MISPQ8IVT2 679 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 ELOA3Q8NG57 546 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 OR52L1Q8NGH7 329 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 OR51A7Q8NH64 312 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 ZNF563Q8TA94 476 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 TTC9Q92623 222 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 TMCO6Q96DC7 493 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 TNFRSF13CQ96RJ3 184 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 DOK1Q99704 481 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 NAA50Q9GZZ1 169 aaKnown RBP18.59■□□□□ 0.57
ATG4D-204ENST00000586417 MCCC2Q9HCC0 563 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 MMP25Q9NPA2 562 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 DKK4Q9UBT3 224 aa18.59■□□□□ 0.57
ATG4D-204ENST00000586417 RPL36Q9Y3U8 105 aaKnown RBP18.59■□□□□ 0.57
ATG4D-204ENST00000586417 ZZEF1O43149 2961 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 LRRN3E7EW58 273 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 GMFGO60234 142 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 SLC2A10O95528 541 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 HMGN1P05114 100 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 FBXO45P0C2W1 286 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 BMP7P18075 431 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 TACR3P29371 465 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 GRK5P34947 590 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 P2RX1P51575 399 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 UBE2UQ5VVX9 321 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 LNX2Q8N448 690 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 ZNF420Q8TAQ5 688 aaPredicted RBP18.58■□□□□ 0.57
ATG4D-204ENST00000586417 M1APQ8TC57 530 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 DUSP19Q8WTR2 217 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 RASL10BQ96S79 203 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 CDCA4Q9BXL8 241 aa18.58■□□□□ 0.57
ATG4D-204ENST00000586417 B4DXG7 233 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 HPP00738 406 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 LCKP06239 509 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 PGCP20142 388 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 ITPKBP27987 946 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 GSTT1P30711 240 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 EGR4Q05215 589 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 AADACL4Q5VUY2 407 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 B4GALNT2Q8NHY0 566 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 SLC22A8Q8TCC7 542 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 TEX12Q9BXU0 123 aa18.58■□□□□ 0.56
ATG4D-204ENST00000586417 PCNX3Q9H6A9 2034 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 HTR3EA5X5Y0 456 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 PRODHO43272 600 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 WISP1O95388 367 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 TMED10P49755 219 aaKnown RBP18.57■□□□□ 0.56
ATG4D-204ENST00000586417 CBFBQ13951 182 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 CYP4Z2PQ8N1L4 340 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 LRRC17Q8N6Y2 441 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 ANKK1Q8NFD2 765 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 GPR119Q8TDV5 335 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 TAS2R16Q9NYV7 291 aa18.57■□□□□ 0.56
ATG4D-204ENST00000586417 C1QTNF9BB2RNN3 333 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 CDC40O60508 579 aaKnown RBP eCLIP18.56■□□□□ 0.56
ATG4D-204ENST00000586417 OR7A10O76100 309 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 C1QTNF9P0C862 333 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 SLC9A3P48764 834 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 NTRK2Q16620 822 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms