RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TMCO6Q96DC7 493 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 SECISBP2Q96T21 854 aaKnown RBP10.87□□□□□ -0.67
GGA3-217ENST00000583667 MESP1Q9BRJ9 268 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 DEFB126Q9BYW3 111 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 DUSP21Q9H596 190 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 CTPS2Q9NRF8 586 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 NDUFA13Q9P0J0 144 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 BLOC1S6Q9UL45 172 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 MED31Q9Y3C7 131 aa10.87□□□□□ -0.67
GGA3-217ENST00000583667 IGLV3-32A0A0A0MS00 114 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 SH3D21A4FU49 640 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 GTPBP1O00178 669 aaKnown RBP10.86□□□□□ -0.67
GGA3-217ENST00000583667 CDK2AP1O14519 115 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 NDUFB5O43674 189 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 CLPTM1O96005 669 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 POU2F1P14859 743 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 NR1H2P55055 460 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 TPD52P55327 224 aaPredicted RBP10.86□□□□□ -0.67
GGA3-217ENST00000583667 SUMO3P55854 103 aaPredicted RBP10.86□□□□□ -0.67
GGA3-217ENST00000583667 KRTAP10-9P60411 292 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 CDC42P60953 191 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 COPZ1P61923 177 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 LSM11P83369 360 aaKnown RBP eCLIP10.86□□□□□ -0.67
GGA3-217ENST00000583667 IL5RAQ01344 420 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 C17orf67Q0P5P2 114 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 CHAF1BQ13112 559 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 NTRK2Q16620 822 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 MEP1AQ16819 746 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 ALG10BQ5I7T1 473 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 RPL13AP3Q6NVV1 102 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 WDR88Q6ZMY6 472 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 NRMQ8IXM6 262 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 ENTHD1Q8IYW4 607 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 CDK20Q8IZL9 346 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 ZNF295-AS1Q8N0V1 137 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 ZNF614Q8N883 585 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 OR5W2Q8NH69 310 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 PHOSPHO1Q8TCT1 267 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 TMEM255BQ8WV15 326 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 LIPHQ8WWY8 451 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 OSTF1Q92882 214 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 TMEM43Q9BTV4 400 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 TBL1XR1Q9BZK7 514 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 YARS2Q9Y2Z4 477 aaKnown RBP10.86□□□□□ -0.67
GGA3-217ENST00000583667 TPRKBQ9Y3C4 175 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 PCDHGB1Q9Y5G3 927 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 NINQ8N4C6 2090 aa10.86□□□□□ -0.67
GGA3-217ENST00000583667 NSG1A0A0A6YYJ2 146 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 ZNF354AO60765 605 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 PTP4A3O75365 173 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 WBP4O75554 376 aaKnown RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 ANGPTL1O95841 491 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 HPP00738 406 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 JUNBP17275 347 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 ELK4P28324 431 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 MSX1P28360 303 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 EVI2BP34910 448 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 SLC1A3P43003 542 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 ALDH3B2P48448 385 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 P2RX1P51575 399 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 GAS1P54826 345 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 SNTA1Q13424 505 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 DNASE1L3Q13609 305 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 BTBD16Q32M84 506 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 ZNF791Q3KP31 576 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 PLEKHN1Q494U1 663 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 TMEM201Q5SNT2 666 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 CBLN3Q6UW01 205 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 ATG4DQ86TL0 474 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 PRR22Q8IZ63 422 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 OR8J1Q8NGP2 316 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 BRIX1Q8TDN6 353 aaKnown RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 APH1BQ8WW43 257 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 IPCEF1Q8WWN9 437 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 C3orf49Q96BT1 292 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 RNF31Q96EP0 1072 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 IP6K3Q96PC2 410 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 TMUB1Q9BVT8 246 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 POLDIP3Q9BY77 421 aaKnown RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 ZBTB20Q9HC78 741 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 MEPEQ9NQ76 525 aaPredicted RBP10.85□□□□□ -0.67
GGA3-217ENST00000583667 ZNF226Q9NYT6 803 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 SELENONQ9NZV5 590 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 RPS6KB2Q9UBS0 482 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 RNF6Q9Y252 685 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 CARD8Q9Y2G2 431 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 PCDHGB7Q9Y5F8 929 aa10.85□□□□□ -0.67
GGA3-217ENST00000583667 DPPA5A6NC42 116 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 WWP2O00308 870 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 SLC1A7O00341 560 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 OIP5O43482 229 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 CDC40O60508 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
GGA3-217ENST00000583667 SMNDC1O75940 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
GGA3-217ENST00000583667 CD99P14209 185 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 PGCP20142 388 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 MAP2K6P52564 334 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 SMSP52788 366 aa10.84□□□□□ -0.67
GGA3-217ENST00000583667 SLC35A2P78381 396 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms