RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 KIAA1257Q9ULG3 409 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 AP4B1Q9Y6B7 739 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 TAF1LQ8IZX4 1826 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 TIAM2Q8IVF5 1701 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 TNS1Q9HBL0 1735 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 AKAP11Q9UKA4 1901 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 CACNA1SQ13698 1873 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ELP1O95163 1332 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ERICH2A1L162 156 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 GSAPA4D1B5 854 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 CCT8L1PA6NM43 557 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 LRRIQ3A6PVS8 624 aaPredicted RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 SH2D1BO14796 132 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 LSM1O15116 133 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 POLR1CO15160 346 aaPredicted RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 WBP4O75554 376 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 TOM1L1O75674 476 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 PLEKHA8P1O95397 391 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 LGI1O95970 557 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 GOT2P00505 430 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 CXCL10P02778 98 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 UGT1A6P19224 532 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ANXA13P27216 316 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 CD1BP29016 333 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 AXLP30530 894 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 MDH2P40926 338 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 SLC11A1P49279 550 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ARHGDIAP52565 204 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 CXCL6P80162 114 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 CDKL1Q00532 357 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 LIPEQ05469 1076 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ASPHQ12797 758 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 BTG3Q14201 252 aaPredicted RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 PDK3Q15120 406 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 MAPRE2Q15555 327 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 TGIF1Q15583 401 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 FAM83EQ2M2I3 478 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 C10orf120Q5SQS8 335 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 DDI2Q5TDH0 399 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 SEL1L2Q5TEA6 688 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 OLFML2AQ68BL7 652 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ADAMTSL5Q6ZMM2 481 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 EFL1Q7Z2Z2 1120 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 TPRA1Q86W33 373 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 GRAMD2AQ8IUY3 354 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 COMMD1Q8N668 190 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 OR10T2Q8NGX3 314 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 RDH11Q8TC12 318 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 PDCD6IPQ8WUM4 868 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 MAIP1Q8WWC4 291 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 RLN3Q8WXF3 142 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 OR1E3Q8WZA6 343 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 RAB39BQ96DA2 213 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 GPR137Q96N19 417 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 SIGLEC12Q96PQ1 595 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 TRNT1Q96Q11 434 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 C19orf43Q9BQ61 176 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 DEFB126Q9BYW3 111 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 FAM192AQ9GZU8 254 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ZSCAN16Q9H4T2 348 aaPredicted RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 PALMDQ9NP74 551 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 ABCB10Q9NRK6 738 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 FKBP14Q9NWM8 211 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 STX18Q9P2W9 335 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 PEF1Q9UBV8 284 aaKnown RBP3.8□□□□□ -1.8
NUP88-213ENST00000576862 CIDEBQ9UHD4 219 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 EMCNQ9ULC0 261 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 CELA1Q9UNI1 258 aa3.8□□□□□ -1.8
NUP88-213ENST00000576862 LTBP1Q14766 1721 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 NRXN2Q9P2S2 1712 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 ALOX15BO15296 676 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 ZW10O43264 779 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 B4GALT2O60909 372 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 LY6G6DO95868 133 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 APOA1P02647 267 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 SFTPBP07988 381 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 RPSAP08865 295 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 ZCCHC18P0CG32 403 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 PRKACAP17612 351 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 NMT1P30419 496 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 MAT2AP31153 395 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 SPAM1P38567 509 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 MEOX2P50222 304 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 DSTNP60981 165 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 RPL23AP62750 156 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 FKBP1AP62942 108 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 OTUD4Q01804 1114 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 SPP2Q13103 211 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 BCL2A1Q16548 175 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 GPAT3Q53EU6 434 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 SMUG1Q53HV7 270 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 TMEM41BQ5BJD5 291 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 HHATQ5VTY9 493 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 APOOLQ6UXV4 268 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 B3GLCTQ6Y288 498 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 GCNT7Q6ZNI0 430 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 TPGS1Q6ZTW0 290 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 TRMT10CQ7L0Y3 403 aaKnown RBP3.79□□□□□ -1.8
NUP88-213ENST00000576862 VPS36Q86VN1 386 aa3.79□□□□□ -1.8
NUP88-213ENST00000576862 FADS6Q8N9I5 356 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms