RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LMF1Q96S06 567 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 WDR77Q9BQA1 342 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ULBP3Q9BZM4 244 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 OR52D1Q9H346 318 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 GPN2Q9H9Y4 310 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 GPR83Q9NYM4 423 aa13.35□□□□□ -0.27
COMMD4-221ENST00000567935 WARS2Q9UGM6 360 aaKnown RBP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.35□□□□□ -0.27
COMMD4-221ENST00000567935 ICE1Q9Y2F5 2266 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 KDM4EB2RXH2 506 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SURF4O15260 269 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 NDUFB5O43674 189 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 AHCYL1O43865 530 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 ADAM11O75078 769 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 INMTO95050 263 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SAGP10523 405 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 DBTP11182 482 aaKnown RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 PGCP20142 388 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 MAKP20794 623 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 RBMS1P29558 406 aaKnown RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SLC6A6P31641 620 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 NUDT6P53370 316 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SUMO3P55854 103 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 ZNF91Q05481 1191 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SRSF6Q13247 344 aaKnown RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 TMED1Q13445 227 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 LSAMPQ13449 338 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 CD226Q15762 336 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 ARMC4Q5T2S8 1044 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 GID4Q8IVV7 300 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 LNX2Q8N448 690 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SLC15A4Q8N697 577 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 PFN4Q8NHR9 129 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 MR1Q95460 341 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 C3orf49Q96BT1 292 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SGTBQ96EQ0 304 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 TMEM80Q96HE8 168 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 LRR1Q96L50 414 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 ZNF582Q96NG8 517 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 DDA1Q9BW61 102 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 NDEL1Q9GZM8 345 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 UBQLN3Q9H347 655 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 MEPEQ9NQ76 525 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 PLEKHB1Q9UF11 243 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-221ENST00000567935 ENPP5Q9UJA9 477 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 SIGLEC7Q9Y286 467 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 NPFFR2Q9Y5X5 522 aa13.34□□□□□ -0.27
COMMD4-221ENST00000567935 TRBV11-1A0A0K0K1C0 115 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 ELOA3DA6NLF2 546 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-221ENST00000567935 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 H3BMQ9 156 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 M0R129 80 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 CDC42EP2O14613 210 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 FADS1O60427 444 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 MAN1A2O60476 641 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 CDC40O60508 579 aaKnown RBP eCLIP13.33□□□□□ -0.28
COMMD4-221ENST00000567935 ITGB2P05107 769 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 STSP08842 583 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 CCL4P13236 92 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 CCNA2P20248 432 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 PSMB9P28065 219 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 SLC1A3P43003 542 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 MAP2K4P45985 399 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 RNF144AP50876 292 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-221ENST00000567935 RAB40BQ12829 278 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 EIF3IQ13347 325 aaKnown RBP13.33□□□□□ -0.28
COMMD4-221ENST00000567935 EXT1Q16394 746 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 ELOA3BQ3SY89 546 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 FAM198BQ6UWH4 519 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 OAFQ86UD1 273 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 TMCO5AQ8N6Q1 288 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 ELOA3Q8NG57 546 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 OR4Q3Q8NH05 313 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 OR5W2Q8NH69 310 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 SLC22A8Q8TCC7 542 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 LIPHQ8WWY8 451 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 TMCO6Q96DC7 493 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 ARSGQ96EG1 525 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 SAMD8Q96LT4 415 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 COG8Q96MW5 612 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 RHNO1Q9BSD3 238 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 FUNDC2Q9BWH2 189 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 AMBNQ9NP70 447 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 C20orf141Q9NUB4 165 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 DIMT1Q9UNQ2 313 aaKnown RBP13.33□□□□□ -0.28
COMMD4-221ENST00000567935 CARD8Q9Y2G2 431 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 HEATR5AQ86XA9 2040 aa13.33□□□□□ -0.28
COMMD4-221ENST00000567935 COL27A1Q8IZC6 1860 aaPredicted RBP13.33□□□□□ -0.28
COMMD4-221ENST00000567935 IGHV3-20A0A0C4DH32 117 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 A0A1W2PQ72 361 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 BHLHE40O14503 412 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 PTP4A3O75365 173 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 GABARAPO95166 117 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 ZNF28P17035 718 aa13.32□□□□□ -0.28
COMMD4-221ENST00000567935 C21orf33P30042 268 aaPredicted RBP13.32□□□□□ -0.28
COMMD4-221ENST00000567935 EVI2BP34910 448 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms