RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 ATRQ13535 2644 aa16.58■□□□□ 0.25
GTF3C1-207ENST00000567806 HDAC3O15379 428 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 DNPH1O43598 174 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 KIAA0513O60268 411 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 PTAFRP25105 342 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 MAGEA8P43361 318 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 ZNF83P51522 516 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 NUDT6P53370 316 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 OR2B6P58173 313 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 GPAT3Q53EU6 434 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 OR7E24Q6IFN5 339 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 TYW3Q6IPR3 259 aaKnown RBP16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 PODNL1Q6PEZ8 512 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 ANKRD46Q86W74 232 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 HIPK1Q86Z02 1210 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 FBXL14Q8N1E6 418 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 DNAJA3Q96EY1 480 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 DHRS9Q9BPW9 319 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 CACNG6Q9BXT2 260 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 CADP27708 2225 aa16.58■□□□□ 0.24
GTF3C1-207ENST00000567806 SONP18583 2426 aaKnown RBP16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 CHD3Q12873 2000 aaKnown RBP16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 GOLGA8QA0A0J9YX86 632 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 GOLGA8OA6NCC3 632 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 ZNF716A6NP11 495 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 E7EQL1 145 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 GOLGA8NF8WBI6 632 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 CCNA2P20248 432 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 TTKP33981 857 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 CHI3L1P36222 383 aaPredicted RBP16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 FABP6P51161 128 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 DSCR9P59020 149 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 KCNJ10P78508 379 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 HPCAP84074 193 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 RAB35Q15286 201 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 ADGRG3Q86Y34 549 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 CCDC103Q8IW40 242 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 ZNF781Q8N8C0 355 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 FAM71CQ8NEG0 241 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 ZG16BQ96DA0 208 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 ARL5BQ96KC2 179 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 SORT1Q99523 831 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 REPIN1Q9BWE0 567 aaKnown RBP16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 SAP130Q9H0E3 1048 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 CBLN4Q9NTU7 201 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 TAS2R16Q9NYV7 291 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 TRAPPC4Q9Y296 219 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 SLC25A15Q9Y619 301 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 FBN3Q75N90 2809 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 RTTNQ86VV8 2226 aa16.57■□□□□ 0.24
GTF3C1-207ENST00000567806 A0A1W2PR80 420 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 A8MV72 311 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 M0R1B8 84 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 ITM2AO43736 263 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 SCN2BO60939 215 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 BCAS1O75363 584 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 CD40P25942 277 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 HTR3AP46098 478 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 IDH2P48735 452 aaKnown RBP16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 KHKP50053 298 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 IRX1P78414 480 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 AP1ARQ63HQ0 302 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 SAXO2Q658L1 398 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 CLEC2AQ6UVW9 174 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 STON2Q8WXE9 905 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 PMM1Q92871 262 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 MUS81Q96NY9 551 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 NAA11Q9BSU3 229 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 C1QTNF6Q9BXI9 259 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 OR11A1Q9GZK7 315 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 EXOSC3Q9NQT5 275 aaKnown RBP16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 MRGBPQ9NV56 204 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 PARPBPQ9NWS1 579 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 TMEM181Q9P2C4 612 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 UPB1Q9UBR1 384 aa16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 MARCOQ9UEW3 520 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-207ENST00000567806 ANK3Q12955 4377 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 FAM234BA2RU67 622 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 RNF212BA8MTL3 300 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 TROVE2P10155 538 aaKnown RBP eCLIP16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 SLC16A1P53985 500 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 PHC1P78364 1004 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 SLC35A1P78382 337 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 GABRA6Q16445 453 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 CHRFAM7AQ494W8 412 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 FRRS1Q6ZNA5 592 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 HMGN2P46Q86SG4 172 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 MUC15Q8N387 334 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 TESCQ96BS2 214 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 DDIT4LQ96D03 193 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 NEURL3Q96EH8 262 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 SLC35A5Q9BS91 424 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 NSRP1Q9H0G5 558 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 ABCA1O95477 2261 aa16.55■□□□□ 0.24
GTF3C1-207ENST00000567806 IGHV4-30-2A0A087WSY4 118 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 TMED7-TICAM2A0A0A6YYA0 188 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 EIF1BO60739 113 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 BMP4P12644 408 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 S100A3P33764 101 aa16.54■□□□□ 0.24
GTF3C1-207ENST00000567806 NTF4P34130 210 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms