RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CLDN3O15551 220 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 SCGB2A1O75556 95 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 MED6O75586 246 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 SPAG6O75602 509 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 B3GAT3O94766 335 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 SOX6P35712 828 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 LONP1P36776 959 aaKnown RBP2.64□□□□□ -1.99
UBR1-205ENST00000564540 PTGFRP43088 359 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 RPS9P46781 194 aaKnown RBP2.64□□□□□ -1.99
UBR1-205ENST00000564540 TGFBR3Q03167 851 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 CHIT1Q13231 466 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 SLAQ13239 276 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 MOBPQ13875 183 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 TRIP10Q15642 601 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 SLC5A12Q1EHB4 618 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 ACOT7LQ6ZUV0 252 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 TMEM17Q86X19 198 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 RALGPS2Q86X27 583 aaPredicted RBP2.64□□□□□ -1.99
UBR1-205ENST00000564540 C15orf54Q8N8G6 183 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 FAM133AQ8N9E0 248 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 OR51G2Q8NGK0 314 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 OR52M1Q8NGK5 317 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 OR56B4Q8NH76 319 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 THRSPQ92748 146 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 SPATA16Q9BXB7 569 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 DHX33Q9H6R0 707 aaKnown RBP2.64□□□□□ -1.99
UBR1-205ENST00000564540 ERVW-1Q9UQF0 538 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 KIF3AQ9Y496 699 aa2.64□□□□□ -1.99
UBR1-205ENST00000564540 PLEKHH1Q9ULM0 1364 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 IGHV3OR16-13A0A075B7E8 117 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 A0A087WZY1 265 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 VSTM2BA6NLU5 285 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 AP3B1O00203 1094 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 SDHDO14521 159 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 CHADO15335 359 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 OPN1LWP04000 364 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 GIPP09681 153 aaPredicted RBP2.63□□□□□ -1.99
UBR1-205ENST00000564540 RBMY1CP0DJD4 496 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 ADRB3P13945 408 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 PAICSP22234 425 aaKnown RBP2.63□□□□□ -1.99
UBR1-205ENST00000564540 SULT1E1P49888 294 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 PDZK1IP1Q13113 114 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 BOLA3Q53S33 107 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 CCDC183Q5T5S1 534 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 CENPPQ6IPU0 288 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 CES3Q6UWW8 571 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 ZNF573Q86YE8 665 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 SVOPLQ8N434 492 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 DUSP18Q8NEJ0 188 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 OR52B4Q8NGK2 314 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 OR2T34Q8NGX1 318 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 HDHD3Q9BSH5 251 aaPredicted RBP2.63□□□□□ -1.99
UBR1-205ENST00000564540 ANP32EQ9BTT0 268 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 RAB33BQ9H082 229 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 RIBC2Q9H4K1 309 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 ZNF385DQ9H6B1 395 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 PLGRKTQ9HBL7 147 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 PALMDQ9NP74 551 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 NUFIP1Q9UHK0 495 aaKnown RBP2.63□□□□□ -1.99
UBR1-205ENST00000564540 ASB3Q9Y575 518 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 LRP4O75096 1905 aa2.63□□□□□ -1.99
UBR1-205ENST00000564540 NCAPD2Q15021 1401 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 CXCL11O14625 94 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 HCRTR1O43613 425 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 GMFGO60234 142 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 UFL1O94874 794 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 KRT8P05787 483 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 CHTF8P0CG12 524 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 SFTPCP11686 197 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 CRISP2P16562 243 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 CYP2B6P20813 491 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 CYP2F1P24903 491 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 OTX2P32243 289 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 IL24Q13007 206 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 GPM6BQ13491 265 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 NRF1Q16656 503 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 RABL6Q3YEC7 729 aaPredicted RBP2.62□□□□□ -1.99
UBR1-205ENST00000564540 C6orf89Q6UWU4 347 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 C16orf62Q7Z3J2 963 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 ABHD12BQ7Z5M8 362 aaPredicted RBP2.62□□□□□ -1.99
UBR1-205ENST00000564540 MFSD6LQ8IWD5 586 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 TMEM61Q8N0U2 210 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 RNF139Q8WU17 664 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 FOPNLQ96NB1 174 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 VPS35Q96QK1 796 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 TCHPQ9BT92 498 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 EDEM2Q9BV94 578 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 TPPP3Q9BW30 176 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 GSDMCQ9BYG8 508 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 GORASP2Q9H8Y8 452 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 SMPD3Q9NY59 655 aaPredicted RBP2.62□□□□□ -1.99
UBR1-205ENST00000564540 CTNNA3Q9UI47 895 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 KIF26AQ9ULI4 1882 aaPredicted RBP2.62□□□□□ -1.99
UBR1-205ENST00000564540 SYNRGQ9UMZ2 1314 aa2.62□□□□□ -1.99
UBR1-205ENST00000564540 PRKYO43930 277 aa2.61□□□□□ -1.99
UBR1-205ENST00000564540 P04436 131 aa2.61□□□□□ -1.99
UBR1-205ENST00000564540 ATP6V1B2P21281 511 aa2.61□□□□□ -1.99
UBR1-205ENST00000564540 GLRA2P23416 452 aa2.61□□□□□ -1.99
UBR1-205ENST00000564540 PSMA5P28066 241 aa2.61□□□□□ -1.99
UBR1-205ENST00000564540 KLK7P49862 253 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms